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The map label for this gene is yjbF [H]

Identifier: 218692312

GI number: 218692312

Start: 4700105

End: 4700743

Strand: Direct

Name: yjbF [H]

Synonym: ECED1_4742

Alternate gene names: 218692312

Gene position: 4700105-4700743 (Clockwise)

Preceding gene: 218692310

Following gene: 218692313

Centisome position: 90.22

GC content: 54.46

Gene sequence:

>639_bases
GTGAAGCGACCTGCACTCATTCTTATCTGCCTGCTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACT
ATGGGACAGTCTGTTCGGTACGCCAGGCGTACAGCTGACGGACGATGATATTCAAAATATGCCCTACGCCAGCCAGTACA
TGCAGCTTAATGGCGGGCCGCAGTTATTTGTGGTGCTGGCCTTCGCTGAAGACGGACAACAAAAATGGGTCACTCAGGAT
CAGGCCACCCTTGTCACACAACATGGTCGTCTGGTGAAGACTTTGCTTGGCGGCGACAACCTGATTGAAGTGAATAACCT
TGCCGCCGACCCGCTGATTAAACCCGCACAAATCATTGATGGTGCAACCTGGACGCGCACGATGGGCTGGACCGAGTACC
AGCAGGTACGCTACGCCACCGCGCGCTCAGTCTTCAAATGGAATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACC
CCGGTTCGCGTGCTGGACGAAGAAGTCTTCACTGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCA
AATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTACTTCCCGGTGAAAACCACCCTCATCAAGGCGGCAAAACAATGA

Upstream 100 bases:

>100_bases
GGTGAACGAGTGCGGTCACCGCATCTGCAGCTTGAAGTATGAAGGGGATTAACCATAACCACACTCCGGTGTGGTTATTC
TGCCCCTCTGGAGAAGAGTC

Downstream 100 bases:

>100_bases
TTAAACAAACTATTGTCGCGTTGCTTTTGAGTGCGGGGGCGTCATCAGTCTTCGCGGCGGGAACCGTCAAGGTGTTCAGC
AATGGCAGCAGTGAGGCCAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQD
QATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIIDGATWTRTMGWTEYQQVRYATARSVFKWNGTDTVKVGSDET
PVRVLDEEVFTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ

Sequences:

>Translated_212_residues
MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQD
QATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIIDGATWTRTMGWTEYQQVRYATARSVFKWNGTDTVKVGSDET
PVRVLDEEVFTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
>Mature_212_residues
MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQD
QATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIIDGATWTRTMGWTEYQQVRYATARSVFKWNGTDTVKVGSDET
PVRVLDEEVFTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcC [H]

Homologues:

Organism=Escherichia coli, GI87082360, Length=212, Percent_Identity=98.1132075471698, Blast_Score=432, Evalue=1e-122,
Organism=Escherichia coli, GI1787221, Length=212, Percent_Identity=38.6792452830189, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021308 [H]

Pfam domain/function: PF11102 DUF2886 [H]

EC number: NA

Molecular weight: Translated: 23842; Mature: 23842

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCHHHHEEECCCC
QLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIID
EEEEEEEECCCCCHHHCCCCHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCHHHHHC
GATWTRTMGWTEYQQVRYATARSVFKWNGTDTVKVGSDETPVRVLDEEVFTDQARWHNRY
CCCCEECCCCHHHHHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCE
WIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
EECCCCCCCHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCHHHHEEECCCC
QLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIID
EEEEEEEECCCCCHHHCCCCHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCHHHHHC
GATWTRTMGWTEYQQVRYATARSVFKWNGTDTVKVGSDETPVRVLDEEVFTDQARWHNRY
CCCCEECCCCHHHHHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCE
WIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
EECCCCCCCHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]