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The map label for this gene is yihS [H]

Identifier: 218692165

GI number: 218692165

Start: 4524611

End: 4525852

Strand: Reverse

Name: yihS [H]

Synonym: ECED1_4580

Alternate gene names: 218692165

Gene position: 4525852-4524611 (Counterclockwise)

Preceding gene: 218692166

Following gene: 218692164

Centisome position: 86.88

GC content: 53.38

Gene sequence:

>1242_bases
ATGAAATGGTTTAACACTTTAAGTCACAACCGTTGGCTGGAACAGGAAACCGATCGCATCTTTGATTTTGGTAAAAAATC
CGTAGTACCGACCGGATTTGGCTGGTTAGGCAATAAAGGGCAAATCAAAGAAGAGATGGGCACCCATCTGTGGATCACAG
CTCGTATGTTGCACGTTTATTCCGTTGCTGCGGCGATGGGCCGACCTGGCGCTTACTCGTTGGTTGATCACGGTATCAAA
GCCATGAATGGCGCACTGCACGATAAAAAATATGGCGGTTGGTATGCCTGCGTGAATGACGAGGGCGTGGTGGATGCCTC
CAAACAGGGCTATCAACATTTCTTTGCTCTGCTGGGTGCTGCCAGCGCCGTCACTACCGGTCATCCGGAAGCGCGCAAGC
TGCTCGATTACACCATTGAAATTATCGAGAAATACTTCTGGAGCGAAGAAGAGCAGATGTGCCTGGAGTCCTGGGATGAA
GCCTTCAGCAAAACCGAAGAGTATCGCGGCGGCAATGCCAATATGCACGCGGTGGAAGCCTTCCTGATTGTCTATGACGT
CACCCATGACAAAAAATGGCTGGATCGCGCGATTCGCGTGGCTTCCGTGATTATCCACGACGTCGCCAGAAATAATCATT
ATCGCGTTAACGAACACTTCGATACCCAGTGGAATCCGCTGCCAGATTACAACAAAGATAACCCGGCGCACCGCTTCCGC
GCGTTCGGAGGTACTCCGGGCCACTGGATCGAATGGGGCCGTTTAATGCTGCACATTCACGCGGCCCTGGAAGCCCGTTG
CGAACAACCGCCAGCATGGCTGCTAGAAGATGCCAAAGGTCTGTTTAACGCCACCGTGCGCGATGCCTGGGCACCCGATG
GCGCGGACGGGATTGTTTATACCGTTGACTGGGAAGGAAAACCGGTGGTCCGCGAACGTGTGCGTTGGCCTATCGTCGAA
GCGATGGGTACGGCCTACGCGCTCTACACCGTCACTGGCGATCGCCAGTACGAAACCTGGTATCAGACATGGTGGGACTA
CTGCATCAAATACCTGATGGACTACGAAAATGGTTCATGGTGGCAGGAGCTGGATGCGGACAATAAGGTCACCACCAAAG
TCTGGGACGGCAAACAGGATATTTATCATCTGCTGCATTGTCTGGTGATCCCACGTATCCCGTTAGCGCCAGGCCTGGCT
CCGGCGGTTGCGGCGGGTCTGCTGGATATTAACGCGAAATAA

Upstream 100 bases:

>100_bases
CGAGCTGATGCTGCGTGACGTTTGCGCACCGAAATTACAACAACTTGGCGATATCGTCGACGAAATGATGGCTAAACGCC
GTTAAGATGGGGATACAAAA

Downstream 100 bases:

>100_bases
CTGACTAAAAAAACGACATATCAGGCTGCACGCCGGGTATGTCGTTATTCAATAAAGGTACCTCGTATGCAAATCACCAA
CATGCATTGCAGTGGACAGA

Product: putative glucosamine isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKWFNTLSHNRWLEQETDRIFDFGKKSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIK
AMNGALHDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVE
AMGTAYALYTVTGDRQYETWYQTWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGLA
PAVAAGLLDINAK

Sequences:

>Translated_413_residues
MKWFNTLSHNRWLEQETDRIFDFGKKSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIK
AMNGALHDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVE
AMGTAYALYTVTGDRQYETWYQTWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGLA
PAVAAGLLDINAK
>Mature_413_residues
MKWFNTLSHNRWLEQETDRIFDFGKKSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIK
AMNGALHDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVE
AMGTAYALYTVTGDRQYETWYQTWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGLA
PAVAAGLLDINAK

Specific function: Unknown

COG id: COG2942

COG function: function code G; N-acyl-D-glucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87082342, Length=413, Percent_Identity=99.0314769975787, Blast_Score=852, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819 [H]

Pfam domain/function: PF07221 GlcNAc_2-epim [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 47396; Mature: 47396

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS01295 ISPD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWFNTLSHNRWLEQETDRIFDFGKKSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVY
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCEEEHHHHHHHHH
SVAAAMGRPGAYSLVDHGIKAMNGALHDKKYGGWYACVNDEGVVDASKQGYQHFFALLGA
HHHHHHCCCCCHHHHHHHHHHHHCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEA
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEE
FLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVY
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
TVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWDYCIKYLMDYENGSW
EEECCCCHHHHHHHCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCH
WQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGLAPAVAAGLLDINAK
HHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKWFNTLSHNRWLEQETDRIFDFGKKSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVY
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCEEEHHHHHHHHH
SVAAAMGRPGAYSLVDHGIKAMNGALHDKKYGGWYACVNDEGVVDASKQGYQHFFALLGA
HHHHHHCCCCCHHHHHHHHHHHHCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEA
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEE
FLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVY
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
TVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWDYCIKYLMDYENGSW
EEECCCCHHHHHHHCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCH
WQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGLAPAVAAGLLDINAK
HHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]