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The map label for this gene is yfeT [C]

Identifier: 218692109

GI number: 218692109

Start: 4457283

End: 4458128

Strand: Reverse

Name: yfeT [C]

Synonym: ECED1_4518

Alternate gene names: 218692109

Gene position: 4458128-4457283 (Counterclockwise)

Preceding gene: 218692110

Following gene: 218692104

Centisome position: 85.58

GC content: 40.78

Gene sequence:

>846_bases
ATGAATAACATAACCGTAAAAAGTCTGATTCAAAGCAATTACCCTACACTGCATCAGGCGGAAAAAAAGGTCGCTGACTA
TATTCTTAGCCACGCACATGAAGTCGTGAACTATAGTGTCACTGAACTATCAGAAAAAAGCCATGCCAGTGAAGCGACTA
TCGTACGCACCTGTAAGAAATTAGGTTATCAGGGTTATTACCATTTAAAAATTGCATTAGCAAAAGAAGTCATTAATCCT
GACAATAGCTATCCTGAAAATACCGACTTCAGCGATATAACATCTTTGGCAACCTTCTTATTAAAAAAACAGGCCGAAGA
TTTAATACAATCAACGCAATTTTTTAATGCCGAAGTGCTTGAGTCCATTCTCAAACTACTTGCTAATTGCGATACTATTT
TCTTTTTTGCTGCTGGAAATTCAAACCCTCTGGCCGTTTATGGTGCTTATAAATTCAGCCAACTCGGATTAAAAACCGTT
GTTCACGTCAGCCCGGAAATGCAAATTAATGCGGCATATTCTATGGGGAAACGCGACCTGGCGATTGGTATTTCTAACTC
TGGCAGCACCAACTTAATGGTCGATATCTTTAAAGTGGTGAAAGAGCGCGGTGCCAAATCCGTTTGTATCACTAACTATA
TTAAATCTCCGTTATCAAAACTCTCCACCCATCAACTCAATACCGCGGTCAGCGATAAAATCTTCTTTGAAGCCTTCGAC
TCCACTCGCGTTCCGGCAATGGGCGTTATTGATATGCTGGTGCTGTTGTTTATGTATAAAAACAAGGCGCATTACGAGAA
ATACCGCACCCGTGAAGAGTTTCTTGGCTCCCGTTTCAAGGGGTAA

Upstream 100 bases:

>100_bases
AATCATTACGTTCACTGCACACCTTCATTTTTTCACACCTATCCACGCCTGAAAACTATGTTATAATCAGCACTTTCTGT
CAGAATGAAATTTACTAATT

Downstream 100 bases:

>100_bases
AAGGTCATCCTTTCACCCCTTGTGCAGGTTTAGCTGTTCAGTAGCTCACGCGCCTGCGCCAGGACATTTTCCGGCGTAAC
ACCAAAGTGTTTGAACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKKLGYQGYYHLKIALAKEVINP
DNSYPENTDFSDITSLATFLLKKQAEDLIQSTQFFNAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTV
VHVSPEMQINAAYSMGKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIFFEAFD
STRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFKG

Sequences:

>Translated_281_residues
MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKKLGYQGYYHLKIALAKEVINP
DNSYPENTDFSDITSLATFLLKKQAEDLIQSTQFFNAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTV
VHVSPEMQINAAYSMGKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIFFEAFD
STRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFKG
>Mature_281_residues
MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKKLGYQGYYHLKIALAKEVINP
DNSYPENTDFSDITSLATFLLKKQAEDLIQSTQFFNAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTV
VHVSPEMQINAAYSMGKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIFFEAFD
STRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFKG

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=268, Percent_Identity=23.8805970149254, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1788159, Length=273, Percent_Identity=22.7106227106227, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082369, Length=251, Percent_Identity=18.3266932270916, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082130, Length=259, Percent_Identity=24.7104247104247, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31486; Mature: 31486

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LGYQGYYHLKIALAKEVINPDNSYPENTDFSDITSLATFLLKKQAEDLIQSTQFFNAEVL
HCCCCEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSMGKRDL
HHHHHHHHCCCEEEEEEECCCCCEEEEECCHHHHHCHHHEEEECCCCEEEHHHHCCCCEE
AIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIFFEAFD
EEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHECC
STRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFKG
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LGYQGYYHLKIALAKEVINPDNSYPENTDFSDITSLATFLLKKQAEDLIQSTQFFNAEVL
HCCCCEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSMGKRDL
HHHHHHHHCCCEEEEEEECCCCCEEEEECCHHHHHCHHHEEEECCCCEEEHHHHCCCCEE
AIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIFFEAFD
EEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHECC
STRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFKG
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]