| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yigB [H]
Identifier: 218692088
GI number: 218692088
Start: 4433086
End: 4433802
Strand: Direct
Name: yigB [H]
Synonym: ECED1_4497
Alternate gene names: 218692088
Gene position: 4433086-4433802 (Clockwise)
Preceding gene: 218692087
Following gene: 218692089
Centisome position: 85.1
GC content: 56.62
Gene sequence:
>717_bases ATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGACACCCTTTACGATAACCGTCCGGT GATTTTGCGCACCGAGCAGGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATC TGCAACGCCTGCGCCAGGCGGTACGGGAAGCGGAACCCGAGATTTATCACGACGTGACGCGCTGGCGTTTTCGTTCGATT GAACAAGCGATGCTCGACGCCGGGCTGAGTGCCGAAGAAGCCAGTGCAGGCGCACACGCGGCAATGATCAACTTTGCCAA ATGGCGCAGCCGGATCGACGTCCCGCAGCAAACCCACGACACCTTAAAACAGCTGGCGAAGAAATGGCCGCTGGTGGCGA TCACCAACGGTAACGCCCAGCCGGAACTGTTTGGTTTGGGGCATTATTTTGAGTTTGTGCTGCGCGCTGGCCCGCACGGG CGCTCAAAACCGTTCAGCGACATGTACTTACTGGCGGCGGAAAAACTTAACGTGCCGATCGGTGAGATCTTACATGTCGG GGACGATCTCACCACTGACGTGGGTGGGGCAATTCGCAGCGGAATGCAGGCCTGTTGGATCAGACCGGAAAATGGCGATC TGATGCAAACCTGGGACAGCCGTTTACTGCCGCATCTGGAAATTTCCCGGTTGGCATCTCTGACCTCGCTGATATAA
Upstream 100 bases:
>100_bases ATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCA CGCGCCAAACGGGGGAAATA
Downstream 100 bases:
>100_bases TCAGCAAATCTGTATATATACCCAGCTTTTTGGCGGAGGGCGTTGCGCTTCTCCGCCCAACCTATTTTTACGCGGCGGTG CCAATGGACGTTTCTTACCT
Product: flavin mononucleotide phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MRFYRPLGRISALTFDLDDTLYDNRPVILRTEQEALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSI EQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGHYFEFVLRAGPHG RSKPFSDMYLLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI
Sequences:
>Translated_238_residues MRFYRPLGRISALTFDLDDTLYDNRPVILRTEQEALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSI EQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGHYFEFVLRAGPHG RSKPFSDMYLLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI >Mature_238_residues MRFYRPLGRISALTFDLDDTLYDNRPVILRTEQEALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSI EQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGHYFEFVLRAGPHG RSKPFSDMYLLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjjG [H]
Homologues:
Organism=Escherichia coli, GI2367295, Length=238, Percent_Identity=98.7394957983193, Blast_Score=486, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 27082; Mature: 27082
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYRPLGRISALTFDLDDTLYDNRPVILRTEQEALTFVQNYHPALRSFQNEDLQRLRQA CCCCCHHHHHHEEEECCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHH VREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHD HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH TLKQLAKKWPLVAITNGNAQPELFGLGHYFEFVLRAGPHGRSKPFSDMYLLAAEKLNVPI HHHHHHHHCCEEEEECCCCCCHHEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCH GEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI HHHHHCCCCHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRFYRPLGRISALTFDLDDTLYDNRPVILRTEQEALTFVQNYHPALRSFQNEDLQRLRQA CCCCCHHHHHHEEEECCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHH VREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHD HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH TLKQLAKKWPLVAITNGNAQPELFGLGHYFEFVLRAGPHGRSKPFSDMYLLAAEKLNVPI HHHHHHHHCCEEEEECCCCCCHHEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCH GEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI HHHHHCCCCHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]