Click here to switch to the map view.

The map label for this gene is yicH [H]

Identifier: 218691938

GI number: 218691938

Start: 4263404

End: 4265113

Strand: Direct

Name: yicH [H]

Synonym: ECED1_4340

Alternate gene names: 218691938

Gene position: 4263404-4265113 (Clockwise)

Preceding gene: 218691937

Following gene: 218691949

Centisome position: 81.84

GC content: 53.92

Gene sequence:

>1710_bases
ATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGTGATCGCTGGCCTCTATTTTCTTCTGCA
AACCCGCTGGGGAGCAGAACATATCAGCGCATGGGTTTCCGAGAATAGCGACTATCATCTGGCCTTCGGGGCGATGGATC
ACCGTTTTTCCGCGCCATCTCATATCGTGCTGGAGAACGTCACGTTTGGCCGTGATGGCCAGCCCGCGACCCTGGTGGCA
AAAAGTGTCGACATTGCGCTAAGCAGTCGGCAACTGACCGAACCACGCCATGTCGATACCATCCTGCTGGAAAACGGGAC
GCTGAATCTCACCGACCAGACCGCGCCGCTACCGTTCAAAGCCGATCGTCTGCAACTGCGTGATATGGCGTTTAATAGCC
CGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTGGTTCCGTGGTCACCAGAAGCCGGTAAAGTGCTG
GGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGG
CAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGC
GTAACGCTGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATCCGTCTACAAAGCGAAAAATCGCTAACCGAC
TTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTCATCGACGCTCGTTTGCAAGGTCCGGA
CTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAAC
TGTCGATGAACGCCAGCGAGTTTATTTATGGCTCGCTGCATTTATTTGATCCGATTATAAACGCGGAATTTTCCCCGCAG
GGCGTAGCACTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTCAGGAAACTGGCAACGCGACGGGAA
AACGCTGATCCTCGATGATGCGGCAATTGCCGGACTGGAATATACCTTGCCAAAAAACTGGCAACAGTTGTGGATGGAAA
CGACACCCAGTTGGTTAAACAGCCTGCAACTGAAGAGATTTAGCGCCAGCCGCAATCTGATCATTGATATCGACCCTGAC
TTCCCGTGGCAGCTCACCGCGCTCGATGGTTACGGTGCCAATCTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAG
TGGCTCGGCGAATCTGAATGCCGCCGCCGCAACGTTTAATCGTGTTGATGTCCGTCGTCCGTCGCTGGCGCTAACTGCCA
ACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCAGTGTTTCACAA
ACGCCACAACGTCAGACCCATATCAGCCTGAATGGACGCGGTGTGCCGGTGAATATTTTGCAACATTGGGGATGGCCTGA
ATTACCGTTGACTGGCGACGGCAATATTCAGCTTACCGCCAGTGGCGATATTCAGGTCAATGTCCCGCTGAAACCTACGG
TTAGCGGGCAATTGCATGCCGTGAATGCCGCAAAGCAGCAAGTGACTCAAACCATGAATGCGGGCGTAGTTTCCAGTGGT
GAAGTTACGTCGACGGAGCCGGTGCAGTAA

Upstream 100 bases:

>100_bases
AATTACCGCCGCAGTCTCACCTCTTTCACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGC
ATTTCACGGGATGGAAGACC

Downstream 100 bases:

>100_bases
AAATAAGGACGCTAGCGGATATCAGCGCTAGCGTTCCCCGTTATTAGCGCAAAATTCCATACTCACTGCACAATAACCAT
TTCACCGGTTCATCTTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVA
KSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVL
GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQ
GVALRQFTSRWEGGMVRTSGNWQRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPSWLNSLQLKRFSASRNLIIDIDPD
FPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
TPQRQTHISLNGRGVPVNILQHWGWPELPLTGDGNIQLTASGDIQVNVPLKPTVSGQLHAVNAAKQQVTQTMNAGVVSSG
EVTSTEPVQ

Sequences:

>Translated_569_residues
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVA
KSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVL
GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQ
GVALRQFTSRWEGGMVRTSGNWQRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPSWLNSLQLKRFSASRNLIIDIDPD
FPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
TPQRQTHISLNGRGVPVNILQHWGWPELPLTGDGNIQLTASGDIQVNVPLKPTVSGQLHAVNAAKQQVTQTMNAGVVSSG
EVTSTEPVQ
>Mature_569_residues
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVA
KSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVL
GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQ
GVALRQFTSRWEGGMVRTSGNWQRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPSWLNSLQLKRFSASRNLIIDIDPD
FPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
TPQRQTHISLNGRGVPVNILQHWGWPELPLTGDGNIQLTASGDIQVNVPLKPTVSGQLHAVNAAKQQVTQTMNAGVVSSG
EVTSTEPVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790088, Length=569, Percent_Identity=98.4182776801406, Blast_Score=1136, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 62312; Mature: 62312

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC
HIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFK
EEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCCCCCC
ADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVLGTKAQIQFSAGSLSLNDVPA
CCCEEEEHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCEEEEEEECCCEEECCCCC
TNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
CEEEEECCCCCCEEEEEECCCHHHCCEECCCCCCCCCCCEEEEEEEEEEEEECCCCHHHH
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASE
HHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEECEEEECCEECCCCCCCCCCEEECCHHH
FIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGGMVRTSGNWQRDGKTLILDDAAIAGLE
EEEEEHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECHHCCCEE
YTLPKNWQQLWMETTPSWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTD
EECCCCHHHHHHHCCHHHHHHHHHEEECCCCCEEEECCCCCCEEEEEECCCCCEEEEEEC
HKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
CCCEEEECCCCCCCHHEEECEEECCCCCEEEEECCCEEEHHHHHHHHHCCHHHHHHHHHC
TPQRQTHISLNGRGVPVNILQHWGWPELPLTGDGNIQLTASGDIQVNVPLKPTVSGQLHA
CCCCCEEEEECCCCCEEHHHHHCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEE
VNAAKQQVTQTMNAGVVSSGEVTSTEPVQ
EHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC
HIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFK
EEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCCCCCC
ADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVLGTKAQIQFSAGSLSLNDVPA
CCCEEEEHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCEEEEEEECCCEEECCCCC
TNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
CEEEEECCCCCCEEEEEECCCHHHCCEECCCCCCCCCCCEEEEEEEEEEEEECCCCHHHH
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASE
HHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEECEEEECCEECCCCCCCCCCEEECCHHH
FIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGGMVRTSGNWQRDGKTLILDDAAIAGLE
EEEEEHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECHHCCCEE
YTLPKNWQQLWMETTPSWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTD
EECCCCHHHHHHHCCHHHHHHHHHEEECCCCCEEEECCCCCCEEEEEECCCCCEEEEEEC
HKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
CCCEEEECCCCCCCHHEEECEEECCCCCEEEEECCCEEEHHHHHHHHHCCHHHHHHHHHC
TPQRQTHISLNGRGVPVNILQHWGWPELPLTGDGNIQLTASGDIQVNVPLKPTVSGQLHA
CCCCCEEEEECCCCCEEHHHHHCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEE
VNAAKQQVTQTMNAGVVSSGEVTSTEPVQ
EHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]