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The map label for this gene is yhjV [H]

Identifier: 218691824

GI number: 218691824

Start: 4136889

End: 4138160

Strand: Direct

Name: yhjV [H]

Synonym: ECED1_4218

Alternate gene names: 218691824

Gene position: 4136889-4138160 (Clockwise)

Preceding gene: 218691822

Following gene: 218691833

Centisome position: 79.41

GC content: 45.2

Gene sequence:

>1272_bases
ATGCAGCACAACACACTACCGAAACACGATCAGAAATTGCCGTTTACACGCTACGACTTCGGCTGGGTTTTATTATGCAT
AGGCATGGCGATTGGTGCCGGAACCGTGCTGATGCCAGTACAAATTGGCTTGAAGGGAATTTGGGTATTTATTACCGCAG
CGATCATTGCTTATCCTGCCACCTGGGTAGTACAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGAC
TACACCGATATTATCAGTCATTACCTGGGGAAGAACTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCA
CGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCGTACCTGAAAACCTTCGGTTTAACCGATGCCGATC
TTTCTCAATCTCTATTTTATAAAGTCGCCATTTTCGCCGTACTGGTGGCGATTGCGTCTGGTGGTGAACGATTACTGTTT
AAGATTTCCGGACCAATGGTGGTGGTCAAAGTGGGGATTATTGTCGTGTTCGGTTTTGCGATGATCCCGCACTGGAATTT
CGCCAATATAACCGCCTTCCTGCAAGCCTCCGACTTTTTCCGCGATGTCCTGCTTACTATTCCATTTTGCTTCTTTTCCG
CGGTATTTATTCAGGTACTTAACCCAATGAATATTGCCTATCGTAAACGGGAAGCGGATAAAGTACTGGCAACCCGGCTC
GCGCTGCGTACCCACCGGATTAGCTATATCACGCTCATTGCGGTGATCTTGTTTTTTGCCTTTTCGTTTACCTTCTCAAT
TAGCCACGAAGAAGCCGTTTCTGCCTTTGAACAAAATATCTCGGCACTGGCACTGGCCGCGCAGGTGATCCCTGGGCATA
TCATTCATATCACCTCTACGGTACTGAATATCTTTGCCGTACTGACTGCATTCTTTGGCATTTATCTCGGTTTCCACGAG
GCCATTAAAGGCATTATTCTCAATCTGTTAAGCCGAATTATTGATACCAGGAAAATTAACTCACTCGTGCTGACTCTGGC
GATCTGCACTTTTATCGTCATTACGTTGACGATTTGGGTTTCGTTTCGTGTATCGGTACTGGTGTTCTTTCAGTTGGGAA
GCCCGTTATATGGCATTGTGTCGTGCCTCATTCCGTTTTTCCTGATCTATAAAGTCTCACAACTGGAAAAACTTCGCGGG
TTTAAAGCCTGGATGATTCTGCTGTACGGCATTTTGTTATGCTTGTCGCCACTGTTGAAGTTGATTGAGTAA

Upstream 100 bases:

>100_bases
CATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTTGCGAGGCCGAC
TTCTTTCTGGACAGGACTTT

Downstream 100 bases:

>100_bases
ACCGGAGCGCATGGCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACGGCAAAACAGGCTACCAGTTG
ACCGCCGTAGTCTTTTAGCT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MQHNTLPKHDQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCND
YTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLFYKVAIFAVLVAIASGGERLLF
KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFLQASDFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRL
ALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHE
AIKGIILNLLSRIIDTRKINSLVLTLAICTFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKVSQLEKLRG
FKAWMILLYGILLCLSPLLKLIE

Sequences:

>Translated_423_residues
MQHNTLPKHDQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCND
YTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLFYKVAIFAVLVAIASGGERLLF
KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFLQASDFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRL
ALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHE
AIKGIILNLLSRIIDTRKINSLVLTLAICTFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKVSQLEKLRG
FKAWMILLYGILLCLSPLLKLIE
>Mature_423_residues
MQHNTLPKHDQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCND
YTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLFYKVAIFAVLVAIASGGERLLF
KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFLQASDFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRL
ALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHE
AIKGIILNLLSRIIDTRKINSLVLTLAICTFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKVSQLEKLRG
FKAWMILLYGILLCLSPLLKLIE

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789961, Length=423, Percent_Identity=97.6359338061466, Blast_Score=784, Evalue=0.0,
Organism=Escherichia coli, GI145693183, Length=412, Percent_Identity=45.1456310679612, Blast_Score=376, Evalue=1e-105,
Organism=Escherichia coli, GI1789160, Length=408, Percent_Identity=25, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1789504, Length=424, Percent_Identity=24.0566037735849, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1789211, Length=407, Percent_Identity=20.6388206388206, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694
- InterPro:   IPR018227 [H]

Pfam domain/function: PF03222 Trp_Tyr_perm [H]

EC number: NA

Molecular weight: Translated: 47384; Mature: 47384

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCC
>Mature Secondary Structure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HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]