| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is yhjR [H]
Identifier: 218691819
GI number: 218691819
Start: 4132323
End: 4132511
Strand: Reverse
Name: yhjR [H]
Synonym: ECED1_4213
Alternate gene names: 218691819
Gene position: 4132511-4132323 (Counterclockwise)
Preceding gene: 218691823
Following gene: 218691818
Centisome position: 79.33
GC content: 45.5
Gene sequence:
>189_bases ATGAATAACAATGAACCAGATACTCTGCCTGATCCCGCGATAGGCTATATCTTCCAGAATGATATTTTGGCGTTAAAGCA GGCATTTTCACTGCCTGATATTGATTATGCCGATATTTCCCAACGCGAACAGTTGGCCGCGGCATTAAAACGCTGGCCGT TGCTGGCAGAGTTTGCGCAACAAAAGTAG
Upstream 100 bases:
>100_bases TGAGCACATTCCCGTCTCGCCGTAAACAATAAACCGACGAAATGCTCACAGTTAGAATTGTCTCATGAACGGTACGGTTA TTTCATAGGGATCAAGAAAA
Downstream 100 bases:
>100_bases GGGATTGGTGAATGGCCGTACTGGGATTGCAGGGGGTTCGGGGAGGCGTGGGGACAACAACCATCACCGCCGCATTAGCC TGGTCATTACAAATGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MNNNEPDTLPDPAIGYIFQNDILALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQQK
Sequences:
>Translated_62_residues MNNNEPDTLPDPAIGYIFQNDILALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQQK >Mature_62_residues MNNNEPDTLPDPAIGYIFQNDILALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789956, Length=62, Percent_Identity=98.3870967741936, Blast_Score=124, Evalue=8e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7032; Mature: 7032
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNEPDTLPDPAIGYIFQNDILALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHC QK CC >Mature Secondary Structure MNNNEPDTLPDPAIGYIFQNDILALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHC QK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]