Click here to switch to the map view.

The map label for this gene is yhjK [H]

Identifier: 218691813

GI number: 218691813

Start: 4119955

End: 4121904

Strand: Reverse

Name: yhjK [H]

Synonym: ECED1_4207

Alternate gene names: 218691813

Gene position: 4121904-4119955 (Counterclockwise)

Preceding gene: 218691814

Following gene: 218691812

Centisome position: 79.12

GC content: 52.31

Gene sequence:

>1950_bases
ATGGTGGCAGCCGTTGTCCTGGTGTTCGTTTTTATTTTTTGCACCGTTTTGCTGTTCCATCTGGTCCAGCAGAATCGCTA
TAACACGGCTACGCAACTGGAAAGCATTGCTCGCTCTGTCCGCGAACCCTTATCTTCTGCCATTTTGAAAGGCGATATTC
CCGAAGCGGAAGCTATTCTTGCCAGCATTAAACCGGCCGGCGTGGTCAGCCGTGCCGATGTAGTGCTGCCCAACCAGTTC
CAGGCGCTGCGTAAAAGTTTTATTCCAGAGCGTCCGGTGCCGGTAATGGTTACTCGCCTGTTTGAGCTACCGGTGCAAAT
CTCGCTGGGCGTTTACTCGCTGGAACGTCCGGCAAACCCGCAGCCAATTGCCTATCTGGTGTTACAGGCGGATTCCTTCC
GCATGTATAAGTTCGTGATGAGCACCCTCTCAACGTTAGTGACCATTTACTTACTTTTGTCGTTAATATTGACGGTGGCG
ATTAGCTGGTGCATTAACCGCCTGATTTTGCATCCGTTACGCAATATTGCTCGCGAACTTAACGCCATCCCACCCCAGGA
GCTTGTTGGTCACCAACTGGCATTACCGCGTCTGCATCAGGACGATGAAATCGGTATGTTGGTGCGCAGTTACAACCTCA
ACCAGCAATTGCTGCAGCGCCATTATGAAGAACAGAACGAAAATGCGATGCGCTTCCCGGTGTCGGATTTGCCGAACAAA
GCCTTGCTGATGGAGATGCTGGAGCAGGTGGTGGCGCGTAAACAAACTACCGCGCTGATGATCATCACCTGTGAAACCCT
GCGTGATACTGCGGGTGTGCTGAAAGAGGCGCAACGAGAAATTCTGCTGCTGACGCTGGTGGAAAAACTCAAATCGGTAC
TGTCGCCACGCATGATCCTCGCGCAGATTAGCGGTTATGACTTTGCTGTCATTGCCAACGGTGTACAGGAACCGTGGCAC
GCTATCACATTAGGTCAGCAAGTGCTCACTATCATGAGCGAGCGCCTGCCGATTGAACGTATTCAACTCCGTCCGCACTG
TAGCATTGGCGTGGCGATGTTCTACGGCGATCTCACCGCCGAACAGCTTTACAGTCGCGCTATTTCTGCGGCATTTACCG
CTCGCCATAAAGGCAAAAATCAGATTCAGTTCTTTGATCCGCAGCAGATGGAAGCCGCCCAGCAGCGGTTGACGGAAGAG
AGCGATATCCTTAATGCACTGGAAAATCATCAGTTTGCGATTTGGTTACAGCCACAGGTCGAGATGACCAGCGGTAAACT
GGTCAGTGCGGAAGTGTTACTGCGTATCCAGCAACCGGATGGCAGTTGGGACCTGCCCGATGGCTTAATCGATCGCATTG
AGTGCTGTGGGCTGATGGTTACCGTCGGTCACTGGGTGCTGGAAGAGTCCTGTCGATTGCTTGCTGCCTGGCAAGAGCGC
GGCATTATGCTGCCCTTGTCGGTAAACCTCTCAGCGCTGCAACTGATGCATCCAAATATGGTGGCGGATATGCTGGAATT
GTTAACCCGCTATCGTATTCAGCCGGGAACACTGATTCTGGAAGTGACAGAAAGCCGACGTATTGACGATCCTCATGCTG
CGGTGGCAATCCTCCGTCCGCTGCGCAATGCCGGAGTTCGGGTGGCGCTGGATGATTTCGGCATGGGCTACGCAGGGCTG
CGTCAGCTGCAGCATATGAAATCGTTGCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGTTTGCCGGAAGA
TAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACCTACAAATGATTGCCGAAGGCGTGGAGACTGAAG
CACAACGCGACTGGCTGGCAAAAGCTGGCGTTGGTATTGCCCAGGGCTTCCTTTTTGCTCGCCCACTCCCTATTGAAATC
TTCGAAGAGAGTTACCTGGAAGAAAAGTAG

Upstream 100 bases:

>100_bases
TAATGCCGCTGCGATCGGGTATACTCGGGCGGTAATCTGGGATTTCCGGGGGGGAGACAATTTGCGCGTAAGTCGCTCGT
TAACAATCAAGCAGATGGCA

Downstream 100 bases:

>100_bases
CTACCCCAAACTGATTACAAAACTTTAAAAAGTGCTGGTTTGTGCGAGCCAGCTCAAACTTTTTAACCTTTTTGTTTCAA
TTATGATCCAGGTACATTTC

Product: putative phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 649

Protein sequence:

>649_residues
MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQF
QALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA
ISWCINRLILHPLRNIARELNAIPPQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK
ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH
AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQQRLTEE
SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER
GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL
RQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI
FEESYLEEK

Sequences:

>Translated_649_residues
MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQF
QALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA
ISWCINRLILHPLRNIARELNAIPPQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK
ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH
AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQQRLTEE
SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER
GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL
RQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI
FEESYLEEK
>Mature_649_residues
MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQF
QALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA
ISWCINRLILHPLRNIARELNAIPPQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK
ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH
AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQQRLTEE
SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER
GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL
RQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI
FEESYLEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=649, Percent_Identity=99.3836671802773, Blast_Score=1313, Evalue=0.0,
Organism=Escherichia coli, GI1787541, Length=428, Percent_Identity=31.7757009345794, Blast_Score=193, Evalue=3e-50,
Organism=Escherichia coli, GI87081921, Length=416, Percent_Identity=31.9711538461538, Blast_Score=189, Evalue=5e-49,
Organism=Escherichia coli, GI87081743, Length=237, Percent_Identity=35.8649789029536, Blast_Score=148, Evalue=1e-36,
Organism=Escherichia coli, GI1790496, Length=251, Percent_Identity=37.4501992031873, Blast_Score=146, Evalue=4e-36,
Organism=Escherichia coli, GI1786507, Length=243, Percent_Identity=33.7448559670782, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI87081845, Length=246, Percent_Identity=31.7073170731707, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87081980, Length=262, Percent_Identity=31.6793893129771, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1788502, Length=253, Percent_Identity=31.2252964426877, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1788849, Length=252, Percent_Identity=28.968253968254, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI87082096, Length=211, Percent_Identity=33.175355450237, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1787055, Length=267, Percent_Identity=25.8426966292135, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI1787410, Length=153, Percent_Identity=32.6797385620915, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]

EC number: NA

Molecular weight: Translated: 72978; Mature: 72978

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50885 HAMP ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP
HHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECEEEECCCCCC
QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAIPPQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK
CCCCCHHHHCCHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEECCHHHCCCH
ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL
HHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA
HHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEHHHHHCCHHH
EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQQRLTEESDILNALENHQFAIWLQPQV
HHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCE
EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER
EECCCCEEEEEHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP
CEEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH
LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQS
HHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP
HHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECEEEECCCCCC
QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAIPPQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK
CCCCCHHHHCCHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEECCHHHCCCH
ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL
HHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA
HHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEHHHHHCCHHH
EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQQRLTEESDILNALENHQFAIWLQPQV
HHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCE
EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER
EECCCCEEEEEHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP
CEEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH
LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQS
HHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 10493123 [H]