| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is kdgK [H]
Identifier: 218691810
GI number: 218691810
Start: 4115745
End: 4116674
Strand: Direct
Name: kdgK [H]
Synonym: ECED1_4204
Alternate gene names: 218691810
Gene position: 4115745-4116674 (Clockwise)
Preceding gene: 218691807
Following gene: 218691820
Centisome position: 79.0
GC content: 56.24
Gene sequence:
>930_bases ATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGG CGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGC TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCGCGGCGAGAACGTTGATACTTCCCTGACCCAACGGATG GAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAACGTACGTTCTACTACTGGCGTAACGAAGC CGCCGCCAAATTCTGGCTGGAGAGTGAGCAATCCGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGA GCGGGATTAGCCTGGCGATCTTAAGCCCGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGC GGAAAAGTGATTTTCGACAATAACTATCGTCCACGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTGTACCAACAAAT GCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGATGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCA TTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGC GAAGGGTTAGTGGATGTTCCGGCGGTAAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAG TGCCGGTTATCTGGCGGTACGTTTGACGGGCGGAATTGCGGAAGACGCAGCGAAACGCGGGCACCTGACCGCAAGTACCG TTATTCAGTATCGCGGCGCGATTATCCCGCGTGAAGCGATGCCAGCGTAA
Upstream 100 bases:
>100_bases CTGGCTCAAAAAAATAATGGAACAATGTTTTAATATGGTTGACCAGCAAACCACCACAGCGCAAACTAACGCTAATTTTT TACAGATCAGGTTCACGACT
Downstream 100 bases:
>100_bases AAGCAGCATATGCAAAAGGCTGGATAGAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACT CATCACCATCAGGCATTACT
Product: ketodeoxygluconokinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWRGENVDTSLTQRM ENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANG GKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAG EGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGIAEDAAKRGHLTASTVIQYRGAIIPREAMPA
Sequences:
>Translated_309_residues MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWRGENVDTSLTQRM ENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANG GKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAG EGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGIAEDAAKRGHLTASTVIQYRGAIIPREAMPA >Mature_308_residues SKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWRGENVDTSLTQRME NRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGG KVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGE GLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGIAEDAAKRGHLTASTVIQYRGAIIPREAMPA
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=309, Percent_Identity=99.3527508090615, Blast_Score=634, Evalue=0.0, Organism=Escherichia coli, GI87081971, Length=276, Percent_Identity=28.2608695652174, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 34008; Mature: 33877
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFS CCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCCHHEEEEEHHHHCCCHHH QQMLDAWRGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAA HHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCHHHHEECCCCHHH ICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGGKVIFDNNYRPRLWASKEET HHHHHCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEECCHHHH QQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAG HHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCEEEEECC EGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGIAEDAAKRGHLTASTVIQYRGA CCCEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHCCC IIPREAMPA CCCHHCCCC >Mature Secondary Structure SKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFS CCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCCHHEEEEEHHHHCCCHHH QQMLDAWRGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAA HHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCHHHHEECCCCHHH ICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGGKVIFDNNYRPRLWASKEET HHHHHCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEECCHHHH QQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAG HHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCEEEEECC EGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGIAEDAAKRGHLTASTVIQYRGA CCCEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHCCC IIPREAMPA CCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]