| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yhjG [H]
Identifier: 218691808
GI number: 218691808
Start: 4112616
End: 4114691
Strand: Reverse
Name: yhjG [H]
Synonym: ECED1_4202
Alternate gene names: 218691808
Gene position: 4114691-4112616 (Counterclockwise)
Preceding gene: 218691809
Following gene: 218691804
Centisome position: 78.98
GC content: 53.23
Gene sequence:
>2076_bases ATGAGGAAGCGAACGATGAGCAAGGCAGGCAAAATAACCGCTGCGATTTCAGGGGCTTTCTTGTTGTTGATTGTCGTGGC GATCATTTTGATTGCAACTTTTGACTGGAATCGACTCAAACCGACCATCAACCAGAAAGTCTCTGCGGAGTTGAATCGTC CGTTCGCTATCCGTGGCGATCTGGGCGTGGTGTGGGAGCGGCAAAAACAAGAAACTGGCTGGCGCAGCTGGGTGCCGTGG CCCCATGTACACGCGGAAGACATCATTCTTGGCAATCCACCGGATATTCCCGAAGTCACAATGGTGCATTTGCCGCGAGT AGAAGCGACGCTGGCCCCGCTGGCGCTGCTGACCAAAACGGTCTGGTTGCCGTGGATCAAGCTCGAAAAGCCCGACGCGC GCCTGATTCGCCTCTCCGAAAAGAACAATAACTGGACGTTTAATCTCGCCAACGATGACAACAAAGACGCGAATGCAAAG CCGTCGGCGTGGTCGTTTCAGCTGGATAATATTCTTTTCGATCAAGGGCGGATCGCCATTGATGACAAAGTAAGCAAAGC GGATCTGGAAATTTTTGTCGATCCGTTAGGCAAGCCGCTGCCGTTCAGCGAAGTTACCGGATCGAAAGGTAAAGCGGATA AAGAAAAGGTGGGCGATTACGTTTTTGGCCTGAAGGCGCAGGGACGTTATAACGGTGAACCGCTCACTGGTACGGGAAAA ATAGGCGGTATGCTGGCGCTGCGTGGCGAAGGAACGCCGTTTCCGGTACAGGCTGATTTCCGCTCTGGTAACACCCGTGT TGCTTTTGATGGCGTTGTGAATGACCCAATGAAGATGGGGGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCGCTGG GTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACACCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATC GACACTGAAAAATCGTCGGTCTTTGATTATCGCGGTTTTAATGGGCGCATTGGCGATAGCGATATCCACGGTTCTCTGAT CTATACCACCGGCAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCGGCTGGCGGACCTGGGACCGT TGATTGGCGTTGATTCCGGGAAAGGGGCAGAAAAGTCGAAACGGTCTGAACAGAAGAAGGGCGAAAAAAGCGTTCAGCCT GCGGGCAAAGTGCTGCCTTATGACCGCTTCGAAACCGATAAATGGGACGTTATGGATGCCGATGTTCGCTTCAAAGGGCG GCGCATTGAGCATGGCAGCAGCCTGCCGATTAGCGATCTTTCTACTCATATCATCCTCAAAAATGCTGACCTGCGCCTGC AACCGCTGAAATTTGGCATAGCGGGCGGCAGCATTGCGGCGAATATTCATCTGGAAGGCGATAAAAAGCCGATGCAGGGG CGGGCAGATATTCAGGCTCGTCGACTGAAACTGAAAGAACTGATGCCGGATGTGGAACTGATGCAGAAGACGCTGGGGGA AATGAACGGTGACGCGGAACTACGCGGTAGCGGTAACTCGGTGGCGGCGCTTTTAGGCAACAGTAATGGCAACCTGAAAC TGTTGATGAATGACGGGCTGGTGAGCCGCAACCTGATGGAGATTGTCGGGCTGAATGTTGGTAACTACATTGTCGGTGCG ATATTTGGTGACGATGAGGTGCGGGTGAACTGCGCGGCAGCGAATCTGGATATTGCCAACGGTGTGGCGCGTCCGCAGGT TTTCGCTTTTGATACCGAGAATGCGTTGATCAATGTTACCGGCACGGCAAGTTTTGCTTCGGAACAGCTGGATTTAACTA TCGATCCAGAAAGTAAAGGGATTCGCATTATCACGCTGCGTTCGCCGCTGTATGTGCGTGGGACGTTTAAAAATCCGCAG GCTGGGGTGAAAGCCGGGCCGTTGATTGCCCGTGGTGCTGTTGCGGCGGCACTGGCAACGCTGGTTACGCCAGCGGCAGC ATTGCTGGCACTGATCTCACCTTCCGAAGGGGAGGCTAATCAGTGCCGGACAATTTTGTCGCAGATGAAGAAGTGA
Upstream 100 bases:
>100_bases CCCGGCACCGATAGAAACGCTGAATACGGCGGTTCTGGCGCTATAAGCTGCCTCATTTTCCGCCTGGCTGGACTATCTTT AGGACTGGCACAGGAAGAAT
Downstream 100 bases:
>100_bases TGATAGTTGCCGGATGTCTGACATCCGGCAGTTAAAACGACTACAACGACTGGTGCCGCGTCTCATGCGTTAACAGCAGG GCAATTAACGTCAGTCCGGC
Product: putative outer membrane biogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 691; Mature: 691
Protein sequence:
>691_residues MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPW PHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAK PSAWSFQLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKI DTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQP AGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGIAGGSIAANIHLEGDKKPMQG RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGA IFGDDEVRVNCAAANLDIANGVARPQVFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQ AGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK
Sequences:
>Translated_691_residues MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPW PHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAK PSAWSFQLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKI DTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQP AGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGIAGGSIAANIHLEGDKKPMQG RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGA IFGDDEVRVNCAAANLDIANGVARPQVFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQ AGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK >Mature_691_residues MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPW PHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAK PSAWSFQLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKI DTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQP AGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGIAGGSIAANIHLEGDKKPMQG RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGA IFGDDEVRVNCAAANLDIANGVARPQVFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQ AGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=686, Percent_Identity=99.2711370262391, Blast_Score=1380, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 75086; Mature: 75086
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGD CCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHCCCCEEEECC LGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKT CCEEEECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHH VWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAI HHCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCEEECCCCEEE DDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK CCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCC IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELT CCCEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCHHHCCEEEEEEECCCCCCCHHHHC GVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGD EEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCC VESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDA CCCCEEEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC DVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGIAGGSIAANIHLEGDKKPMQG CEEECCEEECCCCCCCHHHCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCCCC RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGL CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCEEEEECCCC VSRNLMEIVGLNVGNYIVGAIFGDDEVRVNCAAANLDIANGVARPQVFAFDTENALINVT CHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCEEEEEECCCEEEEEE GTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALAT ECCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH LVTPAAALLALISPSEGEANQCRTILSQMKK HHHHHHHHHEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGD CCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHCCCCEEEECC LGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKT CCEEEECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHH VWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAI HHCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCEEECCCCEEE DDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK CCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCC IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELT CCCEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCHHHCCEEEEEEECCCCCCCHHHHC GVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGD EEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCC VESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDA CCCCEEEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC DVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGIAGGSIAANIHLEGDKKPMQG CEEECCEEECCCCCCCHHHCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCCCC RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGL CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCEEEEECCCC VSRNLMEIVGLNVGNYIVGAIFGDDEVRVNCAAANLDIANGVARPQVFAFDTENALINVT CHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCEEEEEECCCEEEEEE GTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALAT ECCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH LVTPAAALLALISPSEGEANQCRTILSQMKK HHHHHHHHHEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]