| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yhiN [H]
Identifier: 218691771
GI number: 218691771
Start: 4068084
End: 4069277
Strand: Reverse
Name: yhiN [H]
Synonym: ECED1_4160
Alternate gene names: 218691771
Gene position: 4069277-4068084 (Counterclockwise)
Preceding gene: 218691773
Following gene: 218691769
Centisome position: 78.11
GC content: 54.77
Gene sequence:
>1194_bases GTGGAAAGGTTTGATGCCATTATTATAGGCGCTGGTGCGGCAGGTATGTTCTGTTCTGCGCTGGCAGGTCAGGCAGGACG CCGGGTTCTGCTGATCGATAATGGTAAAAAACCAGGGCGCAAAATCCTCATGTCTGGCGGTGGGCGCTGCAACTTTACCA ACCTTTATGTCGAACCAGGCGCTTATCTGAGCCAGAATCCGCATTTTTGTAAGTCTGCACTCGCGCGTTTTACCCAGTGG GATTTCATTGATCTGGTCAATAAACACGGCATCGCCTGGCACGAGAAAACGTTAGGGCAGCTCTTCTGCGATGACTCCGC GCAGCAGATTGTCGACATGCTGGTGGATGAGTGCGAGAAGGGCAATGTGGCCTTCAGATTGCGTAGCGAAGTGCTGAGCG TGGCGAAGGATGATACAGGCTTCACGCTTGAACTGAACGGCATGACTGTCGGTTGCGAAAAGCTGGTCATTGCGACCGGT GGACTGTCAATGCCGGGGCTGGGTGCATCGCCGTTTGGTTATAAGATTGCCGAACAATTTGGCCTCAACGTGCTGCCGAC CCGTGCGGGTCTGGTGCCATTCACTCTGCATAAACCGTTGCTTGAAGAGTTACAGGTGCTGGCGGGCGTGGCGGTGCCTT CCGTGATTACCGCTGAAAACGGTACCGTTTTCCGTGAGAACTTACTCTTCACCCACCGCGGCTTATCTGGACCGGCGGTG TTGCAGATTTCCAGCTACTGGCAACCGGGTGAATTTGTCAGCATCAATCTGCTACCGGATGTGGACCTCGAAACCTTCCT GAATGAGCAGCGTAATGCACATCCGAATCAAAGCCTGAAAAACACGCTGGCGGTTCATCTGCCGAAGCGGTTGGTTGAAC GGTTACAACAACTCGGGCAAATCCCGGAGCTCTCGCTAAAACAGCTCAACGTGCGTGACCAACAGACACTGATTAGCACA TTGACTGACTGGCGCGTACAACCCAACGGCACTGAAGGCTATCGCACTGCCGAAGTGACGCTCGGCGGCGTGGACACCAA CGAACTCTCTTCACGGACGATGGAAGCGCGCAAAGTGCCTGGGCTGTACTTCATCGGCGAAGTGATGGACGTCACCGGCT GGCTGGGGGGCTATAACTTCCAGTGGGCGTGGTCGAGTGCATGGGCTTGTGCGCAGGATTTGGTGGCAGAATAA
Upstream 100 bases:
>100_bases TATAATTCAGGCAAATACTTCCTTTTAGTAATATTGATGCTGGTGCGACCACTGAGGAATCTTTACAATTCACGCCCGTT TTTTCTTAGAGGAGCGCAAC
Downstream 100 bases:
>100_bases GAAGCAAAATGTGCTCTCGATACCAGAGGGATTAACCTGAATAAAACCAGATAAGGCGTCCAACGCCTTATCTGAAGCCT TTTTTATTATTTTTTCGCTG
Product: putative oxidoreductase with FAD/NAD(P)-binding domain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVAFRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPELSLKQLNVRDQQTLIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLVAE
Sequences:
>Translated_397_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVAFRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPELSLKQLNVRDQQTLIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLVAE >Mature_397_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVAFRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPELSLKQLNVRDQQTLIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLVAE
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=396, Percent_Identity=98.2323232323232, Blast_Score=808, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 43511; Mature: 43511
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG CCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCC AYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEK CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCC GNVAFRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF CCEEEEEHHHHHHHHCCCCCEEEEECCEEECCEEEEEEECCCCCCCCCCCCCCHHHHHHH GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEECCCCCCEE LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ EEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPELSLKQLNVRDQQTLISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP CCCCHHHHCCCCHHHHHHHHHHHCEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLVAE CEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCC >Mature Secondary Structure MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG CCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCC AYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEK CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCC GNVAFRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF CCEEEEEHHHHHHHHCCCCCEEEEECCEEECCEEEEEEECCCCCCCCCCCCCCHHHHHHH GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEECCCCCCEE LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ EEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPELSLKQLNVRDQQTLISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP CCCCHHHHCCCCHHHHHHHHHHHCEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLVAE CEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]