Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yhgE [H]
Identifier: 218691678
GI number: 218691678
Start: 3962800
End: 3964524
Strand: Reverse
Name: yhgE [H]
Synonym: ECED1_4061
Alternate gene names: 218691678
Gene position: 3964524-3962800 (Counterclockwise)
Preceding gene: 218691679
Following gene: 218691673
Centisome position: 76.1
GC content: 50.32
Gene sequence:
>1725_bases ATGGATAACGTTGAACTTTCACCGGCAACACGCTGGGGGATGATTGCTACCGGATTACTTCAGGGGCTGGTTTGCTACCT GCTGATCGCCTGGCTTGCCGGAAAAAATCACAGTTGGATTGTTTATGGCGTGCCTGCGACCGTCGCGTTTTCATCCGTTT TACTCTTCTCCGTGATCTCCTTTAAACAGAAGCGCCTTTGGGGATGGCTGGCGCTGGTGTTTATTGCCACGCTGGGAATG AGCGGTTGGCTAAAGTGGCAAATTGATGGCATGAACCACTGGAGAGCAGAAAAGGCGCTTTGGGATTTTGGCTGCTATCT GCTGCTGATGGCAATGTTGTTGCTACCGTGGATACAACAAAGCCTTCGCATCCGCAATGACAGTAGCCGCTATCGCTACT TTTACCAGTCAGTATGGCATAACTTACTTATATTACTGGTGATTTTTCTCGCCAATGGCCTGACGTGGCTGGTACTTTTA CTGTGGGGAGAGTTGTTTAAACTTGTTGGCATCACGTTTTTCAAAACGCTCTTTTTTGCAACCGACGGGTTTATTTATCT CACGTTAGGTCTGGTTACCGCACTGGCGGTGATCCTCGCGCGAACACAGTCACGTTTAATCGACTCTATTCAAAAGTTGT TCACGTTAATCGCCACGGGGTTGCTGCCGTTAGTATCATTGCTAACCCTGATGTTTATTATCACCCTGCCGTTTACGGGC CTGAGCGCGATTTCTCGCCACATCTCCGCCGCTGGGTTGCTGTTAACGCTGGCCTTTTTGCAATTGATCTTAATGGCTAT TGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACGGGGCCATTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTC CGCTGTATGTGTTCGCCGCCGCCTGGGCGCTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGCCGACCGCTTGCAGGGC GCGCTGGCGGTGCTGGTGTTACTGGTATGGTCGCTGGGGTATTTTGTCAGTATCGTCTGGCGTAAAGGGCAAAATCCCCT TGATCTTCAGGGCAAAGTGAACCTTGTGGTTTCGTTATTGGTGTTGGTAATACTGGTGCTTCTTAATTCGCCGGTGCTGG ACAGTATGCGCATTAGCGTGAACAGTCATATGGCGCGTTATCAGAGCGGCAAAAACACGCCAGACCAGGTAACTATCTAC ATGCTCGAACAGAGCGGTCGCTATGGACGTGCGGCGCTTGAGTCGCTGAAAAGCGATGCCGAGTATATGAAAGACCCGAA ACGCGCGCGGGATCTGCTGATGGCGTTAGATGGAGAGCAACATCTTCAGGAACAGGTATCGGAAAAAGTATTAGCCGATA ATGTGTTAATTGCCCCAGGTTCTGGTAAACCGGATGCGACATTCTGGTCGGCCTTAATCCAGGATCGCTATAACGTGATG ACCTGTATTGGAAAAGACGCCTGCGTACTGGTCGAGCAAGATCTGAATAGTGATGGTCAGGCGGAGCGGATCCTGTTTGC TTTTAATGATGACAGAGTCATTGTCTATGGCTTTGACTCAACCAGAAAAGAATGGGACGCGCTTGATATGAGTTTACTTC CGCGCAAAATAACGAAAGAAAAATTACTCACAGCTGCGAAGGATGGAAAGCTGGGGACGAGGCCTAAAGCGTGGCGCGAT CTTGTAGTGGATGGTGAAAGGCTGGATGTGAATCTGAATGAGTGA
Upstream 100 bases:
>100_bases GATTCACCACGCTAACTTTTTTTGATTATTTTCTGAAAAAAGCAAAATACTACTGCCCGGATGCGATAATTAACCCACCT TTTGATTCTGGATAACCAAC
Downstream 100 bases:
>100_bases CAAAGCGCATCAGGTGTATTAGTCGTAAAATCCGGCAGAGTCCTCTCTGCCGGACATACTCATTAATGAACTTGCGGATC TGCCGGAGACGCGTTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQIDGMNHWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNLLILLVIFLANGLTWLVLL LWGELFKLVGITFFKTLFFATDGFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFAAAWALWLRVAQYGWTADRLQG ALAVLVLLVWSLGYFVSIVWRKGQNPLDLQGKVNLVVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEQSGRYGRAALESLKSDAEYMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRYNVM TCIGKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSTRKEWDALDMSLLPRKITKEKLLTAAKDGKLGTRPKAWRD LVVDGERLDVNLNE
Sequences:
>Translated_574_residues MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQIDGMNHWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNLLILLVIFLANGLTWLVLL LWGELFKLVGITFFKTLFFATDGFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFAAAWALWLRVAQYGWTADRLQG ALAVLVLLVWSLGYFVSIVWRKGQNPLDLQGKVNLVVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEQSGRYGRAALESLKSDAEYMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRYNVM TCIGKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSTRKEWDALDMSLLPRKITKEKLLTAAKDGKLGTRPKAWRD LVVDGERLDVNLNE >Mature_574_residues MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQIDGMNHWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNLLILLVIFLANGLTWLVLL LWGELFKLVGITFFKTLFFATDGFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFAAAWALWLRVAQYGWTADRLQG ALAVLVLLVWSLGYFVSIVWRKGQNPLDLQGKVNLVVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEQSGRYGRAALESLKSDAEYMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRYNVM TCIGKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSTRKEWDALDMSLLPRKITKEKLLTAAKDGKLGTRPKAWRD LVVDGERLDVNLNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yrdB [H]
Homologues:
Organism=Escherichia coli, GI1789805, Length=574, Percent_Identity=95.8188153310105, Blast_Score=998, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64558; Mature: 64558
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH FKQKRLWGWLALVFIATLGMSGWLKWQIDGMNHWRAEKALWDFGCYLLLMAMLLLPWIQQ HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLRIRNDSSRYRYFYQSVWHNLLILLVIFLANGLTWLVLLLWGELFKLVGITFFKTLFFA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDGFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AWALWLRVAQYGWTADRLQGALAVLVLLVWSLGYFVSIVWRKGQNPLDLQGKVNLVVSLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEQSGRYGRAALESLKSDA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EYMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRYNVM HHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH TCIGKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSTRKEWDALDMSLLPRKITKE HCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH KLLTAAKDGKLGTRPKAWRDLVVDGERLDVNLNE HHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH FKQKRLWGWLALVFIATLGMSGWLKWQIDGMNHWRAEKALWDFGCYLLLMAMLLLPWIQQ HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLRIRNDSSRYRYFYQSVWHNLLILLVIFLANGLTWLVLLLWGELFKLVGITFFKTLFFA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDGFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AWALWLRVAQYGWTADRLQGALAVLVLLVWSLGYFVSIVWRKGQNPLDLQGKVNLVVSLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEQSGRYGRAALESLKSDA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EYMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRYNVM HHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH TCIGKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSTRKEWDALDMSLLPRKITKE HCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH KLLTAAKDGKLGTRPKAWRDLVVDGERLDVNLNE HHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]