Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yfhB [H]
Identifier: 218690675
GI number: 218690675
Start: 2954941
End: 2955576
Strand: Reverse
Name: yfhB [H]
Synonym: ECED1_2988
Alternate gene names: 218690675
Gene position: 2955576-2954941 (Counterclockwise)
Preceding gene: 218690678
Following gene: 218690674
Centisome position: 56.73
GC content: 52.2
Gene sequence:
>636_bases TTGGCAACTCACGAGCGTCGTGTGGTGTTTTTTGACTTAGATGGAACATTGCATCAGCAGGATATGTTCGGCAGTTTTTT GCGTTATTTACTGCGTCGCCAACCGCTGAATGCGTTACTTGTTCTGCCGTTGTTGCCGATCATAGCCATTGCGTTATTGA TAAAAGGTCGTGCGGCACGCTGGCCGATGAGTCTGCTTCTGTGGGGATGCACTTTTGGTCACAATGAAGCGCGTTTGCAG GCGTTGCAGGCCGATTTCGTACGCTGGTTTCGTGACAATGTTACCGCCTTTCCGCTGGTTCAGGAGCGATTAACCACCTA CCTGTTAAGTTCCGATGCTGATATCTGGTTGATTACCGGCTCTCCGCAGCCGCTGGTTGAAGCGGTTTATTTCGATACGC CCTGGCTGCCGCGGGTTAATCTTATCGCCAGTCAGATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCGTTGTCTG GGACATGAAAAGGTCGCGCAACTGGAGCGCAAAATCGGCACGCCGCTGCGGCTGTACAGTGGCTATAGCGACAGTAATCA GGACAACCCGCTGCTTTATTTCTGTCAGCATCGTTGGCGAGTAACTCCGCGCGGTGAACTCCAGCAACTGGAATAG
Upstream 100 bases:
>100_bases CCATGATGCGGTCGATTGTTGCCGGAAAAGTGATGATCTATCTGTTAGGCTATGTAGTAGCGAAAATTAATCAGGATGTT TCAGTCCAGAGGAGTATGGT
Downstream 100 bases:
>100_bases AGTAAAGCATAGCGTCCGTGTATAATGCGCCGCGCTTTTATAACCGGAGTTTTCTTTTTGTCTGAAGTCGAATTTAGCCA CGAATACTGGATGCGTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHNEARLQ ALQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCL GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
Sequences:
>Translated_211_residues MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHNEARLQ ALQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCL GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE >Mature_210_residues ATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHNEARLQA LQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLG HEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082129, Length=211, Percent_Identity=99.0521327014218, Blast_Score=429, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006435 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24437; Mature: 24306
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAAR CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC WPMSLLLWGCTFGHNEARLQALQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITG CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEC SPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYS CCCHHHHHEECCCCCCCHHHHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHHHCCCEEEEC GYSDSNQDNPLLYFCQHRWRVTPRGELQQLE CCCCCCCCCCEEEEEECCEECCCCCCCCCCC >Mature Secondary Structure ATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAAR CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC WPMSLLLWGCTFGHNEARLQALQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITG CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEC SPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYS CCCHHHHHEECCCCCCCHHHHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHHHCCCEEEEC GYSDSNQDNPLLYFCQHRWRVTPRGELQQLE CCCCCCCCCCEEEEEECCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1602968; 9278503 [H]