Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is yfhG [H]
Identifier: 218690670
GI number: 218690670
Start: 2945801
End: 2946514
Strand: Reverse
Name: yfhG [H]
Synonym: ECED1_2982
Alternate gene names: 218690670
Gene position: 2946514-2945801 (Counterclockwise)
Preceding gene: 218690671
Following gene: 218690669
Centisome position: 56.56
GC content: 54.76
Gene sequence:
>714_bases ATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGCTGGCAGGGCTGCCATGTCTGGCATTGCTGGGTTGCGT GCAGAGTCACAATAGGCCAGCCATTGATACGCCAGCAGAAGAAAAAATTCCGGTTTATCAACTGGCTGACTATCTTTCTA CTGAATGTAGCGACATCTGGGCGCTGCAAGGTAAATCTACCGAAACCAATCCGCTTTACTGGCTGCGGGCGATGGATTGT GCTGATCGTTTAATGCCTGCGCAGTCGCGTCAGCAAGCCCGCCAATATGACGACGGCAACTGGCAAAATACCTTTAAACA AGGGATTTTGCTCGCCGACGCCAAAATTACTCCGTATGAGCGCCGCCAGCTGGTCGCGCGCATTGATGCGCTAAGTACCG AGATCCCGGCACAGGTTCGCCCACTGTATCAACTTTGGCGCGACGGTCAGGCGCTGCAACTGCAACTGGCGGAAGAGCGC CAACGCTACAGCAAACTCCAGCAGTCCAGCGACAGCGAGCTGGATACTTTGCGCCAGCAACATCACGTTCTACAACAGCA ACTGGAACTCACTACCCGCAAGCTGGAAAACCTGACCGATATTGAACGCCAGCTCTCGACCCGCAAACCGGCCGGAAATT TCTCGCCGGATACGCCGCACGAGAGTGAAAAGCCCGCGCCATCCACCGATGAGGTCACTCCTGATGAGCCATAA
Upstream 100 bases:
>100_bases CTTCACGTACGACATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAAACTGCCTGCAACAATTACGCCCACTGGGAT AGGCTTTAAGTCTGGTGAAT
Downstream 100 bases:
>100_bases ACCTGCGCATTTATTACTGGTCGATGACGATCCGGGATTGCTGAAACTGCTTGGCCTGCGCCTGACCAGCGAAGGCTACA GTGTGGTCACGGCGGAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNRPAIDTPAEEKIPVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDC ADRLMPAQSRQQARQYDDGNWQNTFKQGILLADAKITPYERRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEER QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTDEVTPDEP
Sequences:
>Translated_237_residues MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNRPAIDTPAEEKIPVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDC ADRLMPAQSRQQARQYDDGNWQNTFKQGILLADAKITPYERRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEER QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTDEVTPDEP >Mature_237_residues MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNRPAIDTPAEEKIPVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDC ADRLMPAQSRQQARQYDDGNWQNTFKQGILLADAKITPYERRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEER QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTDEVTPDEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788906, Length=237, Percent_Identity=97.8902953586498, Blast_Score=452, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27340; Mature: 27340
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNRPAIDTPAEEKIPVYQLADYLSTECSDIW CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGNWQNTFKQGILLADAKITPYE HCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCHHH RRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYSKLQQSSDSELDTLRQQ HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTDEVTPDEP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNRPAIDTPAEEKIPVYQLADYLSTECSDIW CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGNWQNTFKQGILLADAKITPYE HCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCHHH RRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYSKLQQSSDSELDTLRQQ HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTDEVTPDEP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]