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The map label for this gene is ypfE

Identifier: 218690588

GI number: 218690588

Start: 2839738

End: 2840073

Strand: Reverse

Name: ypfE

Synonym: ECED1_2895

Alternate gene names: 218690588

Gene position: 2840073-2839738 (Counterclockwise)

Preceding gene: 218690589

Following gene: 218690587

Centisome position: 54.52

GC content: 50.89

Gene sequence:

>336_bases
ATGGATAAAGAACGCATCATTCAGGAATTTGTGCCCGGTAAACAGGTCACACTGGCGCATCTCATCGCGCATCCCGGCGA
GGAACTGGCGAAGAAAATCGGCGTTCCGGATGCGGGCGCAATCGGCATTATGACGCTAACTCCCGGAGAAACGGCGATGA
TCGCCGGTGATTTAGCGTTGAAAGCCGCCGATGTGCATATCGGTTTTCTCGACCGTTTTAGCGGCGCGCTGGTGATTTAT
GGCTCGGTGGGCGCAGTAGAAGAAGCGTTATCACAAACCGTCAGTGGTTTAGGACGCTTATTAAATTATACGCTTTGTGA
AATGACCAAAAGTTAA

Upstream 100 bases:

>100_bases
AGTGATCTACCTCACCTTTTAAACGCGCTTGCCGAATTTTGTTATTTACTCTGACGAAAAATTGTCACGATACACGAAAG
TTTTTCACAGGCGGCGACTC

Downstream 100 bases:

>100_bases
TACGAGGCATTCATGAAACGAATTGCGTTTGTGGGTACCGTCGGGGCAGGAAAAACAACGTTATTTAATGCGTTGCAGGG
GAATTATACCCTCGCAAGAA

Product: putative carboxysome-like ethanolaminosome structural protein with putative role in ethanol utilization

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIY
GSVGAVEEALSQTVSGLGRLLNYTLCEMTKS

Sequences:

>Translated_111_residues
MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIY
GSVGAVEEALSQTVSGLGRLLNYTLCEMTKS
>Mature_111_residues
MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIY
GSVGAVEEALSQTVSGLGRLLNYTLCEMTKS

Specific function: May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place

COG id: COG4810

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutS/PduU family

Homologues:

Organism=Escherichia coli, GI87082109, Length=111, Percent_Identity=100, Blast_Score=223, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EUTS_ECOL6 (P63747)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_754869.1
- ProteinModelPortal:   P63747
- SMR:   P63747
- EnsemblBacteria:   EBESCT00000045398
- GeneID:   1038635
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c2987
- GeneTree:   EBGT00050000009438
- HOGENOM:   HBG304658
- OMA:   IGIMTIT
- ProtClustDB:   PRK15468
- InterPro:   IPR009307
- InterPro:   IPR000249
- PIRSF:   PIRSF012296
- SMART:   SM00877

Pfam domain/function: PF00936 BMC

EC number: NA

Molecular weight: Translated: 11650; Mature: 11650

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLAL
CCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCEEEECCHHE
KAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS
EEHHEEEEHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLAL
CCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCEEEECCHHE
KAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS
EEHHEEEEHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157