| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yfbJ [H]
Identifier: 218690422
GI number: 218690422
Start: 2662743
End: 2663411
Strand: Direct
Name: yfbJ [H]
Synonym: ECED1_2726
Alternate gene names: 218690422
Gene position: 2662743-2663411 (Clockwise)
Preceding gene: 218690421
Following gene: 218690432
Centisome position: 51.11
GC content: 51.57
Gene sequence:
>669_bases GTGTCAGAAACAGGCAACCTGCTTTGCGGCGGTAAACAAACGGCGCAAACATATCGTGCTGTGGCTGGGACTGGCGCTGG CTTGTCTTGGCCTTGCCATGGTGCTCTGGCTGCTGGTCTTGCAGAACGTACCGGTAGGCATTGCCTACCCGATGTTAAGT CTGAATTTTGTCTGGGTAACGCTGGCTGCAGTAAAACTGTGGCACGAGCCGGTATCGCTGCGTCACTGGTGTGGGTTGGC GTTCATTATTGGCGGCATTGTGATCCTCGGGAGTACGGTGTAATGGGCCTGATGTGGGGATTATTCAGCGTCATTATCGC CTCCGCTGCGCAATTAAGCCTGGGTTTTGCGGCGAGTCATCTGCCGCCAATGACGCACTTATGGGATTTTATCGCGGCGC TGTTAGCTTTTGGCCTGGATGCCCGGATACTGTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAA ACACTACATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGT ACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTT TCCTGCCCACAACAAAACAACGTTACTGA
Upstream 100 bases:
>100_bases GTCATCGATCGTCAGGAGCGTCTGGTGCTAATTCAGTATCGGCCCAAATGATCTGGCTAACATTAGTCTTTGCCAGCTTG CTTAGCGTTGCCGGGCAGTT
Downstream 100 bases:
>100_bases GTTTTCCCTGCCGCTTTACACTGCCGTTCCCACTCATCGGGGCTATAACAGCTTGCAGAAAGAACTTTCACCGTGTGCAG CTTTTCACGATTAATACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGNAGCSKTVARAGIAASLVWVG VHYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYK TLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
Sequences:
>Translated_222_residues MSETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGNAGCSKTVARAGIAASLVWVG VHYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYK TLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY >Mature_221_residues SETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGNAGCSKTVARAGIAASLVWVGV HYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKT LHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArnF family [H]
Homologues:
Organism=Escherichia coli, GI87082075, Length=128, Percent_Identity=99.21875, Blast_Score=246, Evalue=6e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022832 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23873; Mature: 23741
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGN CCCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCC AGCSKTVARAGIAASLVWVGVHYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASH CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVL CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGN CCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCC AGCSKTVARAGIAASLVWVGVHYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASH CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVL CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA