Definition Escherichia coli ED1a chromosome, complete genome.
Accession NC_011745
Length 5,209,548

Click here to switch to the map view.

The map label for this gene is yfbJ [H]

Identifier: 218690422

GI number: 218690422

Start: 2662743

End: 2663411

Strand: Direct

Name: yfbJ [H]

Synonym: ECED1_2726

Alternate gene names: 218690422

Gene position: 2662743-2663411 (Clockwise)

Preceding gene: 218690421

Following gene: 218690432

Centisome position: 51.11

GC content: 51.57

Gene sequence:

>669_bases
GTGTCAGAAACAGGCAACCTGCTTTGCGGCGGTAAACAAACGGCGCAAACATATCGTGCTGTGGCTGGGACTGGCGCTGG
CTTGTCTTGGCCTTGCCATGGTGCTCTGGCTGCTGGTCTTGCAGAACGTACCGGTAGGCATTGCCTACCCGATGTTAAGT
CTGAATTTTGTCTGGGTAACGCTGGCTGCAGTAAAACTGTGGCACGAGCCGGTATCGCTGCGTCACTGGTGTGGGTTGGC
GTTCATTATTGGCGGCATTGTGATCCTCGGGAGTACGGTGTAATGGGCCTGATGTGGGGATTATTCAGCGTCATTATCGC
CTCCGCTGCGCAATTAAGCCTGGGTTTTGCGGCGAGTCATCTGCCGCCAATGACGCACTTATGGGATTTTATCGCGGCGC
TGTTAGCTTTTGGCCTGGATGCCCGGATACTGTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAA
ACACTACATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGT
ACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTT
TCCTGCCCACAACAAAACAACGTTACTGA

Upstream 100 bases:

>100_bases
GTCATCGATCGTCAGGAGCGTCTGGTGCTAATTCAGTATCGGCCCAAATGATCTGGCTAACATTAGTCTTTGCCAGCTTG
CTTAGCGTTGCCGGGCAGTT

Downstream 100 bases:

>100_bases
GTTTTCCCTGCCGCTTTACACTGCCGTTCCCACTCATCGGGGCTATAACAGCTTGCAGAAAGAACTTTCACCGTGTGCAG
CTTTTCACGATTAATACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGNAGCSKTVARAGIAASLVWVG
VHYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYK
TLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY

Sequences:

>Translated_222_residues
MSETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGNAGCSKTVARAGIAASLVWVG
VHYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYK
TLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
>Mature_221_residues
SETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGNAGCSKTVARAGIAASLVWVGV
HYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKT
LHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family [H]

Homologues:

Organism=Escherichia coli, GI87082075, Length=128, Percent_Identity=99.21875, Blast_Score=246, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022832 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23873; Mature: 23741

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGN
CCCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
AGCSKTVARAGIAASLVWVGVHYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SETGNLLCGGKQTAQTYRAVAGTGAGLSWPCHGALAAGLAERTGRHCLPDVKSEFCLGN
CCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
AGCSKTVARAGIAASLVWVGVHYWRHCDPREYGVMGLMWGLFSVIIASAAQLSLGFAASH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA