| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is frmC [H]
Identifier: 218690305
GI number: 218690305
Start: 2527641
End: 2528477
Strand: Direct
Name: frmC [H]
Synonym: ECED1_2603
Alternate gene names: 218690305
Gene position: 2527641-2528477 (Clockwise)
Preceding gene: 218690304
Following gene: 218690309
Centisome position: 48.52
GC content: 53.76
Gene sequence:
>837_bases ATGGAAATGCTCGAAGAGCACCGCTGTTTTGAAGGCTGGCAGCAACGCTGGCGACACGACTCCAGTACCTTAAACTGCCC GATGACGTTCAGTATCTTTCTCCCACCACCTCGTGATCACACCCCGCCACCAGTGCTGTACTGGCTTTCCGGATTAACCT GCAATGACGAGAACTTCACCACCAAGGCGGGTGCCCAGCGCGTGGCGGCGGAACTGGGGATTGTACTGGTGATGCCAGAC ACCAGCCCGCGCGGCGAACAGGTTGCCAACGACGATGGCTACGATTTAGGCCAGGGCGCGGGGTTTTATCTTAACGCCAC GCAACCACCGTGGGCGACACATTACCGGATGTATGATTATCTGCGCGATGAATTACCGGCACTGATTCAGTCGCAATTTA ATGTCAGCGACCGCTGCGCCATTAGCGGTCATTCCATGGGTGGTCACGGTGCACTGATTATGGCGCTGAAAAATCCGGGT AAATACACCAGCGTTTCCGCCTTTGCGCCAATTGTGAATCCGTGCAGCGTCCCGTGGGGAATCAAAGCGTTTAGCACTTA TTTAGGTGAGGACAAAAATGCATGGCTGGAATGGGACAGTTGCGCGTTGATGTATGCCAGTAACGCGCAGGATGCAATCC CGACGCTTATTGATCAGGGTGATAATGATCAGTTTCTTGCTGACCAACTGCAACCTGCAGTACTGGCAGAAGCCGCGCGC CAGAAAGCGTGGCCGATGACGCTGCGTATTCAGCCGGGATATGATCACAGTTACTACTTCATCGCCTCTTTTATAGAGGA TCACCTGCGCTTCCATGCGCAGTATTTACTGAAGTGA
Upstream 100 bases:
>100_bases TAAAACATCGTTATGCAAATACGGAAGTGAAAGTTACTCACAGCACATTGAATAAACGGTATGATGAAGAAATTGCAAAC AACACAACAAGGAGCCACGC
Downstream 100 bases:
>100_bases AAGTCCGCCCGGTTCGCCGGGCATCTTCTCATCAGAAGCGATAATCCACTGCCATAAAGTAACGACGTCCGTCTTCGTTA TAGCTGTAGTCGTCACGACT
Product: S-formylglutathione hydrolase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPD TSPRGEQVANDDGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALIQSQFNVSDRCAISGHSMGGHGALIMALKNPG KYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK
Sequences:
>Translated_278_residues MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPD TSPRGEQVANDDGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALIQSQFNVSDRCAISGHSMGGHGALIMALKNPG KYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK >Mature_278_residues MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPD TSPRGEQVANDDGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALIQSQFNVSDRCAISGHSMGGHGALIMALKNPG KYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=279, Percent_Identity=53.0465949820789, Blast_Score=304, Evalue=5e-83, Organism=Escherichia coli, GI1788477, Length=278, Percent_Identity=98.9208633093525, Blast_Score=582, Evalue=1e-168, Organism=Escherichia coli, GI1786551, Length=276, Percent_Identity=53.2608695652174, Blast_Score=320, Evalue=8e-89, Organism=Caenorhabditis elegans, GI17510185, Length=280, Percent_Identity=45.3571428571429, Blast_Score=243, Evalue=7e-65, Organism=Saccharomyces cerevisiae, GI6322393, Length=297, Percent_Identity=44.4444444444444, Blast_Score=239, Evalue=4e-64, Organism=Drosophila melanogaster, GI45551932, Length=283, Percent_Identity=49.8233215547703, Blast_Score=268, Evalue=4e-72, Organism=Drosophila melanogaster, GI24648347, Length=283, Percent_Identity=49.8233215547703, Blast_Score=267, Evalue=6e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31288; Mature: 31288
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFT CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCEECCCCCC TKAGAQRVAAELGIVLVMPDTSPRGEQVANDDGYDLGQGAGFYLNATQPPWATHYRMYDY CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH LRDELPALIQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWG HHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCC IKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR HHHHHHHHCCCCCCEEEECCEEEEEECCCCHHHHHHHCCCCCCCHHHHHCCHHHHHHHHH QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFT CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCEECCCCCC TKAGAQRVAAELGIVLVMPDTSPRGEQVANDDGYDLGQGAGFYLNATQPPWATHYRMYDY CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH LRDELPALIQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWG HHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCC IKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR HHHHHHHHCCCCCCEEEECCEEEEEECCCCHHHHHHHCCCCCCCHHHHHCCHHHHHHHHH QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA