Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is 218689822
Identifier: 218689822
GI number: 218689822
Start: 2040239
End: 2040991
Strand: Reverse
Name: 218689822
Synonym: ECED1_2091
Alternate gene names: NA
Gene position: 2040991-2040239 (Counterclockwise)
Preceding gene: 218689823
Following gene: 218689821
Centisome position: 39.18
GC content: 54.32
Gene sequence:
>753_bases ATGGCAACACCAAATCCCCTGGAGCCGGTAAAAGGTGCCGGTACCACTCTGTGGGTTTACAACGGCAAGGCTGATGCTTA TGCAAACCCGTTGTCAGACGATGACTGGCAGCGACTGGCTAAGGTGAAGGATCTGACGCCGGGCGAGATGACGGCTGAAC CCTACGATGATAACTACCTGGATGATGAAGACGCGGACTGGACCGCGACCGGGCAGGGACAGAAATCTGCAGGAGATACC AGTTTTACGCTGGCCTGGAAACCGGGAGAAGATGGTCAGAAAGGGCTTATAGGCTGGTTTGAAAGCGGGGATGTGCGGGC CTATAAAATCCGTTTTCCGAACGGCACGGTGGATGTGTTTCGTGGCTGGGTCAGCAGTATCGGTAAGGCCGTGACGGCGA AAGAAGTGATCACCCGCACGGTGAAAGTGACCAACGTGGGCAAACCTTCCGTGGCGGAAGAACGCAGCAAAATTACGCCG GTCACTGCAATTAAGGTGACACCGACATCCGGTACCGTGGAAAAAGGAAAAACAACCACCCTGACGGTTTCTTTTGAGCC GGAAAGTGCAACCGACAAGACGTTCAGAGCGGTTTCCGCCGATCCGTCAACGGGAACCATTGCTGTGAAAGATATGGTGA TCACTGTGACGGGGATTAAGGCCGGAAAAGTGAGTATCCCCGTGATTTCCGGTAATGGTCAGTTTGCCACGGTAGCTGAA GTCACCGTTACTGAAGCGGGCGCTGCAGGGTAA
Upstream 100 bases:
>100_bases ATGGTTACGCAGGGCTATGAGTATCGTCGTGATGACGATATGGCGTTATGGAGCTCTGCGGATCTGACTTATTCCATTAC ATACGAGATGTGAGGACGAT
Downstream 100 bases:
>100_bases ACGGAGGTAATACATGTTTCTGAAAACAGAACAATTTGAATATAACGGTGTATCCGTCATGCTTTCTGAGCTGTCTGCGC TGCAGCGTATTGAGCATCTT
Product: major tail protein V
Products: NA
Alternate protein names: Tail Protein; Gifsy-2 Prophage VmtV; Ig Domain-Containing Domain-Containing Protein; Tail-Like Protein
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAEPYDDNYLDDEDADWTATGQGQKSAGDT SFTLAWKPGEDGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITP VTAIKVTPTSGTVEKGKTTTLTVSFEPESATDKTFRAVSADPSTGTIAVKDMVITVTGIKAGKVSIPVISGNGQFATVAE VTVTEAGAAG
Sequences:
>Translated_250_residues MATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAEPYDDNYLDDEDADWTATGQGQKSAGDT SFTLAWKPGEDGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITP VTAIKVTPTSGTVEKGKTTTLTVSFEPESATDKTFRAVSADPSTGTIAVKDMVITVTGIKAGKVSIPVISGNGQFATVAE VTVTEAGAAG >Mature_249_residues ATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAEPYDDNYLDDEDADWTATGQGQKSAGDTS FTLAWKPGEDGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPV TAIKVTPTSGTVEKGKTTTLTVSFEPESATDKTFRAVSADPSTGTIAVKDMVITVTGIKAGKVSIPVISGNGQFATVAEV TVTEAGAAG
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26367; Mature: 26235
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAEPYDDNYL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC DDEDADWTATGQGQKSAGDTSFTLAWKPGEDGQKGLIGWFESGDVRAYKIRFPNGTVDVF CCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHH RGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTSGTVEKGKTTT HHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCEEE LTVSFEPESATDKTFRAVSADPSTGTIAVKDMVITVTGIKAGKVSIPVISGNGQFATVAE EEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEEE VTVTEAGAAG EEEECCCCCC >Mature Secondary Structure ATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAEPYDDNYL CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC DDEDADWTATGQGQKSAGDTSFTLAWKPGEDGQKGLIGWFESGDVRAYKIRFPNGTVDVF CCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHH RGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTSGTVEKGKTTT HHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCEEE LTVSFEPESATDKTFRAVSADPSTGTIAVKDMVITVTGIKAGKVSIPVISGNGQFATVAE EEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEEE VTVTEAGAAG EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA