| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is folM
Identifier: 218689552
GI number: 218689552
Start: 1763128
End: 1763850
Strand: Direct
Name: folM
Synonym: ECED1_1805
Alternate gene names: 218689552
Gene position: 1763128-1763850 (Clockwise)
Preceding gene: 218689551
Following gene: 218689554
Centisome position: 33.84
GC content: 51.18
Gene sequence:
>723_bases ATGGGTAAAACCCAGTCCTTGCCAATATTAATTACTGGCGGAGGTCGCCGCATCGGCCTCGCCCTCGCATGGCATTTCAT TAATCAAAAGCAACCGGTGATTGTCAGCTATCGGACGCACTATCCCGCCATTGATGGACTGATTAAGGCAGGTGCGCAGT GTATTCAGGCTGATTTTTCGACCAACGACGGTGTGATGGCGTTTGCCGATGAAGTACTAAAAAGCACCCATGGTCTGCGT GCTATTTTGCATAACGCCAGCGCGTGGATGGCGGAAAAACCGGGAGCGCCACTGACCGACGTACTGGCTTGCATGATGCA GATCCACGTTAATACCCCATACCTGCTCAACCATGCTCTGGAAAGATTACTGCGTGGGCACGGACACGCCGCCAGCGATA TCATTCACTTTACCGATTATGTGGTGGAGCGCGGTAGCGACAAACATATTGCGTATGCTGCAAGCAAAGCGGCACTGGAT AATATGACCCGCTCGTTTGCCCGCAAGCTGGCACCGGAAGTGAAAGTGAATTCTATTGCGCCATCGCTGATCCTGTTTAA TGAACATGATGATGCTGAATATCGACAACAGGCGCTGAATAAATCACTGATGAAAACAGCGCCTGGCGAGAAAGAAGTGA TCGACCTGGTCGATTACTTACTTACCAGCTGCTTTGTCACCGGACGCAGTCTCCCACTTGATGGCGGTCGTCATCTGCGT TAA
Upstream 100 bases:
>100_bases AATGGTGCTGATTGGCATGCTGTTAATTGCCTCAGTTCCGGCGACCTGGATGCTGGTGGGATAACGTTCATCCCATCGTT GGATAGCAAAGGAGATAACG
Downstream 100 bases:
>100_bases TGCAGCTTAATCCAGCATATAATCAACACCCATGCGCTTATTCCCCAGCACGCAACAGAGCTAACAAAAGCAGCGGGCAA GCGCATCATTCCGGTGAAAT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: DHFR
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGKTQSLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLIKAGAQCIQADFSTNDGVMAFADEVLKSTHGLR AILHNASAWMAEKPGAPLTDVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSLPLDGGRHLR
Sequences:
>Translated_240_residues MGKTQSLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLIKAGAQCIQADFSTNDGVMAFADEVLKSTHGLR AILHNASAWMAEKPGAPLTDVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSLPLDGGRHLR >Mature_239_residues GKTQSLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLIKAGAQCIQADFSTNDGVMAFADEVLKSTHGLRA ILHNASAWMAEKPGAPLTDVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDN MTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSLPLDGGRHLR
Specific function: Catalyzes the reduction of dihydrofolate to tetrahydrofolate
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FolM subfamily
Homologues:
Organism=Escherichia coli, GI1787891, Length=240, Percent_Identity=98.3333333333333, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=25.8196721311475, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLM_ECOL6 (Q8FHB1)
Other databases:
- EMBL: AE014075 - RefSeq: NP_753893.1 - ProteinModelPortal: Q8FHB1 - SMR: Q8FHB1 - EnsemblBacteria: EBESCT00000041793 - GeneID: 1036028 - GenomeReviews: AE014075_GR - KEGG: ecc:c1998 - NMPDR: fig|199310.1.peg.1936 - GeneTree: EBGT00050000009188 - HOGENOM: HBG750976 - OMA: RAIIHNA - ProtClustDB: PRK06483 - GO: GO:0005488 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 - Gene3D: G3DSA:3.40.50.720 - PANTHER: PTHR19410 - PRINTS: PR00081
Pfam domain/function: PF00106 adh_short
EC number: =1.5.1.3
Molecular weight: Translated: 26349; Mature: 26217
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00061 ADH_SHORT
Important sites: ACT_SITE 152-152
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTQSLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLIKAGAQCIQADFS CCCCCCCCEEEECCCCEEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC TNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLTDVLACMMQIHVNTPYLLNHAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH ERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNSIA HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCC PSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSLPLDGGRHLR CEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GKTQSLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLIKAGAQCIQADFS CCCCCCCEEEECCCCEEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC TNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLTDVLACMMQIHVNTPYLLNHAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH ERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNSIA HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCC PSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSLPLDGGRHLR CEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157