| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218689498
Identifier: 218689498
GI number: 218689498
Start: 1716955
End: 1717278
Strand: Direct
Name: 218689498
Synonym: ECED1_1745
Alternate gene names: NA
Gene position: 1716955-1717278 (Clockwise)
Preceding gene: 218689497
Following gene: 218689499
Centisome position: 32.96
GC content: 44.44
Gene sequence:
>324_bases ATGTTCAACCGTCGCCGGTTGCAATTGGTATTCTGCAACCGGCGTTCATCTGATGTAAGAGATAAAGAATCGATGAGCGA AGTAATCATGATCGTCTCTCCTGGCAAATGGGTATCCGAAGAGCAGTTAATTGCACTTAAAGGAATCAAAAAGGGAACGC TAAAAAAAGCCAGGGAAAAATCGTTTATGGAAGGAAGGGAATATAAGCATGTCGCTCATGACGGTATGCCATGGGATAAC AGTCCATGCTTTTACAACCTGGAAGAAATTGATCGCTGGATTGAGCGCCAGGCATCTGCAAGACCAAGACGTCATCTTGC TTGA
Upstream 100 bases:
>100_bases TCGAAGGTGAGCGCCATAATGCACTTGATGACGCCCGTTATCAGGCAAAATACGTTTCAGCTATCTGGCAAAAACTGATC CCGAGTCAGGCTGATTTTTA
Downstream 100 bases:
>100_bases CTAAAAGCAACACGAACCAATGAGAGAAGCTGAAATGAAATATCCGACAGGCGTGGAAAACCATGGAGGGAAATTACGTA TCTGGTTTGTTTATAAAGGT
Product: putative excisionase
Products: NA
Alternate protein names: Phage Excisionase
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MFNRRRLQLVFCNRRSSDVRDKESMSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDN SPCFYNLEEIDRWIERQASARPRRHLA
Sequences:
>Translated_107_residues MFNRRRLQLVFCNRRSSDVRDKESMSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDN SPCFYNLEEIDRWIERQASARPRRHLA >Mature_107_residues MFNRRRLQLVFCNRRSSDVRDKESMSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDN SPCFYNLEEIDRWIERQASARPRRHLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12708; Mature: 12708
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNRRRLQLVFCNRRSSDVRDKESMSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREK CCCCCEEEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHH SFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRRHLA HHHCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFNRRRLQLVFCNRRSSDVRDKESMSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREK CCCCCEEEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHH SFMEGREYKHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRRHLA HHHCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA