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The map label for this gene is ydfA [H]

Identifier: 218689494

GI number: 218689494

Start: 1712539

End: 1712883

Strand: Direct

Name: ydfA [H]

Synonym: ECED1_1741

Alternate gene names: 218689494

Gene position: 1712539-1712883 (Clockwise)

Preceding gene: 218689493

Following gene: 218689496

Centisome position: 32.87

GC content: 53.33

Gene sequence:

>345_bases
ATGGGTATCCTTCTTTTCATACCAACCCACCCCGCCCCACAGAATGCAGGGCAATACTTCGAGTTACCCGGCAGTGGTCA
GGGGTTAAGTAGCCAGCCCGAGGCGTATGAACATGACGGCGGGAACACTTTGTATAACAGCGCAGCAGGTTTTTGTTCCG
CTACCCCGGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGAGCTTGGCAACAGCGAATCTCTGGTATGCGGCGTG
TTTCCCAACCAGGACGGCACGTTTACCGCGATGACGTATACCAGAAGCAAAACGTTTAAAACGGAAGCTGGCGCGCGTCG
CTGGTTAGCAAGAAACTCTGACTGA

Upstream 100 bases:

>100_bases
TAAAAAGAAAGCACAAAACGCATCATAGCTCACCAAACAACTAGTCACCAGTTAAGACACCGCAAAAATTTACCCATAGG
TATTTACTTTTTAAATACCT

Downstream 100 bases:

>100_bases
TGAAGGTTAGTAATTAAAGAGTTCTCCACAGGCGAAGTGGAATACGTTCGCCGGACACGGGTAAGCATTCGGCATGCTCT
TTAACAATCTGGGTATTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MGILLFIPTHPAPQNAGQYFELPGSGQGLSSQPEAYEHDGGNTLYNSAAGFCSATPALRGNEVSMDTIELGNSESLVCGV
FPNQDGTFTAMTYTRSKTFKTEAGARRWLARNSD

Sequences:

>Translated_114_residues
MGILLFIPTHPAPQNAGQYFELPGSGQGLSSQPEAYEHDGGNTLYNSAAGFCSATPALRGNEVSMDTIELGNSESLVCGV
FPNQDGTFTAMTYTRSKTFKTEAGARRWLARNSD
>Mature_113_residues
GILLFIPTHPAPQNAGQYFELPGSGQGLSSQPEAYEHDGGNTLYNSAAGFCSATPALRGNEVSMDTIELGNSESLVCGVF
PNQDGTFTAMTYTRSKTFKTEAGARRWLARNSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydaF [H]

Homologues:

Organism=Escherichia coli, GI1787854, Length=49, Percent_Identity=87.7551020408163, Blast_Score=93, Evalue=4e-21,
Organism=Escherichia coli, GI87081886, Length=49, Percent_Identity=79.5918367346939, Blast_Score=89, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009821
- ProDom:   PD019047 [H]

Pfam domain/function: PF07151 DUF1391 [H]

EC number: NA

Molecular weight: Translated: 12196; Mature: 12064

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILLFIPTHPAPQNAGQYFELPGSGQGLSSQPEAYEHDGGNTLYNSAAGFCSATPALRG
CCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCC
NEVSMDTIELGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTEAGARRWLARNSD
CCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCEECCCCCHHHHCCCCC
>Mature Secondary Structure 
GILLFIPTHPAPQNAGQYFELPGSGQGLSSQPEAYEHDGGNTLYNSAAGFCSATPALRG
CEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCC
NEVSMDTIELGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTEAGARRWLARNSD
CCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCEECCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]