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The map label for this gene is ydcJ [H]

Identifier: 218689354

GI number: 218689354

Start: 1561737

End: 1563080

Strand: Direct

Name: ydcJ [H]

Synonym: ECED1_1579

Alternate gene names: 218689354

Gene position: 1561737-1563080 (Clockwise)

Preceding gene: 218689352

Following gene: 218689355

Centisome position: 29.98

GC content: 52.98

Gene sequence:

>1344_bases
ATGGCGAACAGCATCACGGCGGATGAGATTCGGGAACAGTTTTCGCAGGCAATGTCAGCCATGTACCAGCAAGAAGTTCC
GCAGTACGGCACGCTGCTGGAACTGGTAGCTGATGTAAATCTGGCGGTGCTGGAAAACAATCCTCAACTGCACGAAAAAA
TGGTAAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCT
ACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACA
TTCGACAGCATTTCGGCCCATTGATGATGCTTCTCTGGCGCGTAATCCCTTCCGCGTTTTTACCTCGTTACTCCGTCTTG
AGCTTATCGAGAACGAAATTTTGCGCCAGAAAGCGGCGGAGATTCTGCGTCAGCGCGATATCTTCACCCCATGTTGTCGA
CAACTGTTAGAGGAATATGAGCAGCAGGGCGGTTTTAACGAAACACAGGCACAGGAGTTTGTGCAGGAAGCCCTGGAAAC
GTTTCGCTGGCACCAGTCAGCAACGGTAGATGAAGAAACCTATCGCGCCTTGCACAACGAACATCGGTTGATTGCTGATG
TGGTCTGTTTTCCTGGATGCCATATCAACCATCTGACGCCACGTACGCTGGATATTGACCGGGTGCAGTCGATGATGCCT
GAATGCGGAATTGAACCCAAAGTTCTGATCGAAGGGCCGCCGCGCCGCGAGGTGCCGATTTTACTACGCCAGACCAGCTT
TAAAGCACTGGAAGAGACGGTGTTGTTTGCGGGGCAGAAACAGGGCACACATACCGCGCGCTTTGGTGAAATTGAGCAGC
GTGGTGTGGCATTAACGCCGAAAGGGCGACAACTGTATGATGATCTTCTGCGGAGCGCTGGAACCGGGCAGGATAATCTC
ACTCACCAAATGCATTTACAGGAAACCTTCCGCACTTTTCCTGACAGTGAGTTTTTAATGCGTCAGCAAGGGCTGGGATG
GTTCCGGTACCGTCTGACGCCTTCGGGTGAGGCGCATCGTCAGGCGATTCATCCCGGAGACGATCCACAGCCCTTAATAG
AACGTGGTTGGGTAGTGGCGCAACCCATTACCTATGAAGATTTCTTGCCCGTTAGCGCGGCGGGGATCTTCCAGTCAAAT
CTGGGTAATGAAACGCAGGCATGCAATCACGGTGATGCCAGTCGCGAAGCATTTGAGCAGGCGTTGGGGGGGCCGGTTTT
GGATGAGTTCCAGCTTTATCAGGAAGCGGAAGAACGCAGTAAACGTCGCTGTGGTTTGCTTTAA

Upstream 100 bases:

>100_bases
ATTGATGTTTTCGCGGCGAGATCACAGTTTGTAAATTCTTCCAGCCGGAGTGAATGCGGTTACCTACACTCCAGATTACT
GACCACTGGAGGCAGACACT

Downstream 100 bases:

>100_bases
ATTCTGACCATCCGCCTTTGCAAAAATTTGCCTGATTTTACAAACGAATCAGGCTCATCCCATCGACATAAAAAAAATGC
CAATTTATGCATATTCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELA
TLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPCCR
QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP
ECGIEPKVLIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRSAGTGQDNL
THQMHLQETFRTFPDSEFLMRQQGLGWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSN
LGNETQACNHGDASREAFEQALGGPVLDEFQLYQEAEERSKRRCGLL

Sequences:

>Translated_447_residues
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELA
TLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPCCR
QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP
ECGIEPKVLIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRSAGTGQDNL
THQMHLQETFRTFPDSEFLMRQQGLGWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSN
LGNETQACNHGDASREAFEQALGGPVLDEFQLYQEAEERSKRRCGLL
>Mature_446_residues
ANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELAT
LRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPCCRQ
LLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPE
CGIEPKVLIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRSAGTGQDNLT
HQMHLQETFRTFPDSEFLMRQQGLGWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNL
GNETQACNHGDASREAFEQALGGPVLDEFQLYQEAEERSKRRCGLL

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3292 [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=447, Percent_Identity=97.9865771812081, Blast_Score=903, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 50834; Mature: 50703

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADEL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHCCHHHH
ARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLA
HHHCHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCHHHC
RNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPCCRQLLEEYEQQGGFNETQAQEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
VQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
ECGIEPKVLIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTP
HCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHCCEEECC
KGRQLYDDLLRSAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLGWFRYRLTPSGEAHR
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCHHHH
QAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQACNHGDASREAFEQ
HCCCCCCCCCHHHHCCCEEECCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
ALGGPVLDEFQLYQEAEERSKRRCGLL
HHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADEL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHCCHHHH
ARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLA
HHHCHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCHHHC
RNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPCCRQLLEEYEQQGGFNETQAQEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
VQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
ECGIEPKVLIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTP
HCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHCCEEECC
KGRQLYDDLLRSAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLGWFRYRLTPSGEAHR
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCHHHH
QAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQACNHGDASREAFEQ
HCCCCCCCCCHHHHCCCEEECCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
ALGGPVLDEFQLYQEAEERSKRRCGLL
HHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]