| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is ompG [H]
Identifier: 218689309
GI number: 218689309
Start: 1500652
End: 1501557
Strand: Direct
Name: ompG [H]
Synonym: ECED1_1527
Alternate gene names: 218689309
Gene position: 1500652-1501557 (Clockwise)
Preceding gene: 218689308
Following gene: 218689311
Centisome position: 28.81
GC content: 49.12
Gene sequence:
>906_bases ATGAAAAAGTTATTACTCTGTACCGCACTGGTGATGTGTGCGGGAATGGCCTGCGCACAGGCCGAGGAAAAGAACGACTG GCACTTTAATATCGGCGCGATGTACGAAATAGAAAACGTCGAGGGTTATGGCGAAGATATGGATGGGCTGGCGGAGCCTT CTGTCTATTTTAATGCCGCCAACGGGCCGTGGAGAATTTCTCTGGCCTATTATCAGGAAGGGCCGGTAGATTATAGCGCG GGTAAACGTGGAACGTGGTTTGATCGCCCGGAGCTGGAGGTACATTATCAGTTCCTCGAAAGCGATGATTTCAGTTTCGG TCTGACTGGTGGTTTCCGTAATTATGGTTATCACTACGTTGATGAACCGGGTAAAGACACGGCGAATATGCAGCGCTGGA AAATTGCGCCAGACTGGGATGTGAAACTGACTGACGATTTACGTTTCAACGGTTGGCTGTCGATGTATAAATTTGCCAAC GATCTGAATACGACCGGTTATGCTGATACCCGTGTCGAAACGGAAACGGGTCTGCAATATACCTTCAACGAAACGGTTGC CTTGCGAGTGAACTATTATCTCGAGCGCGCTTTCAATATGGATGATAGCCGCAATAACGGTGAGTTTTCCACGCAAGAAA TTCGCGCCTATTTGCCGCTGACGCTCGGCAACCACTCGGTGACGCCGTATACGCGCATTGGGCTGGATCGCTGGAGTAAC TGGGACTGGCAGGATGATATTGAACGTGAAGGCCATGATTTTAACCGTGTGGGTTTATTTTACGGTTATGATTTCCAGAA TGGTCTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGCGATAAATTCCATTATGCGG GTGTTGGGGTGAATTACTCGTTCTGA
Upstream 100 bases:
>100_bases TTGATATGACTAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTTGCTAAATACAGGGGGAAGGCATTCTCCCA GGATAATACAAGGAACAATA
Downstream 100 bases:
>100_bases TAATGTGCTAAATTGCCGGATGCGGGGCGAGCGCCAAATCCGGCATATATTTATTTCAACGACATATGCGTAGCAACGGT AATATTTTGTGGTGACGGTT
Product: outer membrane porin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKKLLLCTALVMCAGMACAQAEEKNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRISLAYYQEGPVDYSA GKRGTWFDRPELEVHYQFLESDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN DLNTTGYADTRVETETGLQYTFNETVALRVNYYLERAFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF
Sequences:
>Translated_301_residues MKKLLLCTALVMCAGMACAQAEEKNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRISLAYYQEGPVDYSA GKRGTWFDRPELEVHYQFLESDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN DLNTTGYADTRVETETGLQYTFNETVALRVNYYLERAFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF >Mature_301_residues MKKLLLCTALVMCAGMACAQAEEKNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRISLAYYQEGPVDYSA GKRGTWFDRPELEVHYQFLESDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN DLNTTGYADTRVETETGLQYTFNETVALRVNYYLERAFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF
Specific function: May act as a regulator of the RCS-phosphorelay signal transduction pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787579, Length=301, Percent_Identity=98.3388704318937, Blast_Score=618, Evalue=1e-178,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011250 - InterPro: IPR018981 [H]
Pfam domain/function: PF09381 Porin_OmpG [H]
EC number: NA
Molecular weight: Translated: 34904; Mature: 34904
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLCTALVMCAGMACAQAEEKNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAA CCHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECC NGPWRISLAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLESDDFSFGLTGGFRNYGYHYV CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCHHHCCEEEC DEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQY CCCCCCCCCCEEEEECCCCCEEEECCEEECCHHHHHHHHCCCCCCCCCCCEEECCCCCEE TFNETVALRVNYYLERAFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN EECCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCCCCCC WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYS CCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEEC F C >Mature Secondary Structure MKKLLLCTALVMCAGMACAQAEEKNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAA CCHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECC NGPWRISLAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLESDDFSFGLTGGFRNYGYHYV CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCHHHCCEEEC DEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQY CCCCCCCCCCEEEEECCCCCEEEECCEEECCHHHHHHHHCCCCCCCCCCCEEECCCCCEE TFNETVALRVNYYLERAFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN EECCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCCCCCC WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYS CCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEEC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9721282; 9278503; 11758943 [H]