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The map label for this gene is ymgD

Identifier: 218689116

GI number: 218689116

Start: 1302817

End: 1303146

Strand: Reverse

Name: ymgD

Synonym: ECED1_1313

Alternate gene names: 218689116

Gene position: 1303146-1302817 (Counterclockwise)

Preceding gene: 218689117

Following gene: 218689107

Centisome position: 25.01

GC content: 44.55

Gene sequence:

>330_bases
ATGAAAAAATTTGCTTTACTGGCGGGTCTGTTTGTTTTCGCACCAATGACCTGGGCGCAGGACTACAATATTAAGAACGG
TTTGCCATCAGAAACCTATATTACTTGCGCAGAAGCCAACGAAATGGCAAAAACTGACAGCGCACAGGTTGCAGAAATTG
TTGCGGTAATGGGTAATGCCAGCGTTGCCAGCCGTGATTTAAAAATTGAGCAATCTCCGGAACTGAGCGCCAAAGTGGTA
GAAAAACTGAATCAGGTTTGCGCTAAAGATCCGCAAATGCTGTTGATCACGGCAATTGATGACACCATGCGTGCTATCGG
CAAAAAATAA

Upstream 100 bases:

>100_bases
TGGCGTTCTGACCGGCAATGGCCTCGAAGGGGCGATTAAAGGTGCCGTGATTGGCGGTACGGGTGGTGCAATTCTGGGTA
AAATGAAATAAGGAATGATG

Downstream 100 bases:

>100_bases
TATTTCATATGTTACCGCGTCGATGAATTCGACGCGGTTTTTTAGCTAACGGGCGGGATCAGAACTTATATTTCAGGCCC
ACCATCATTGCGGTGTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVV
EKLNQVCAKDPQMLLITAIDDTMRAIGKK

Sequences:

>Translated_109_residues
MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVV
EKLNQVCAKDPQMLLITAIDDTMRAIGKK
>Mature_109_residues
MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVV
EKLNQVCAKDPQMLLITAIDDTMRAIGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081849, Length=109, Percent_Identity=100, Blast_Score=224, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YMGD_ECOL6 (P0AB47)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_753521.1
- EnsemblBacteria:   EBESCT00000044750
- GeneID:   1035381
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c1616
- GeneTree:   EBGT00050000009891
- HOGENOM:   HBG474473
- ProtClustDB:   CLSK905312

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11852; Mature: 11852

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNA
CCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHHCCC
SVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCC
>Mature Secondary Structure
MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNA
CCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHHCCC
SVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157