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The map label for this gene is ycgX [H]

Identifier: 218689105

GI number: 218689105

Start: 1295009

End: 1295413

Strand: Reverse

Name: ycgX [H]

Synonym: ECED1_1301

Alternate gene names: 218689105

Gene position: 1295413-1295009 (Counterclockwise)

Preceding gene: 218689106

Following gene: 218689104

Centisome position: 24.87

GC content: 37.04

Gene sequence:

>405_bases
ATGGATCAGGTCGTTGTTTTTCAAAAGATGTTTGAGCAAGTGAGAAAAGAGCAAAACTTCTCCTGGTTTTATTCAGAATT
AAAACATCACCGTATTGCACATTACATTTATTATCTGGCTACGGATAACATCAGAATTATTACTCACGATGACACGGTTT
TGTTATTAAGAGGAACCAGGAACCTGTTAAAAGTTAGTACGACCAAGAACCCAGCTAAAATAAAAGAGGCCGCATTGCTT
CATATTCGCGGAAAATCTACATTTCGGGAATACTGTTCAACACTGGCAGGCGCTGGCGTTTTCCGGTGGGTTACTGATGT
TAATCATAACAAACGCAGTTACTACGCCATTGATAATACGCTTTTATATATTGAAGATGTAGAAAATAATAAACCATTAA
TCTAG

Upstream 100 bases:

>100_bases
ACTTTGTACATATCACAGCCAAAGGACAGACCAGATTGAAGTGGTAAAACCGATCGTGCACACTACGCAGTCTCACACCT
AACAAGAGGTTATTATCCTG

Downstream 100 bases:

>100_bases
CTAAAGTTGGGAGCTTAAAAAATGCTTCATAATTCAGTAAGGCATTAGCATAATGGAAATAAAAGTGCAGAGACTATCCC
TATGGATGATTAATACTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALL
HIRGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI

Sequences:

>Translated_134_residues
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALL
HIRGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI
>Mature_134_residues
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALL
HIRGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI

Specific function: Unknown

COG id: COG5562

COG function: function code R; Phage envelope protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybcV and ydfO [H]

Homologues:

Organism=Escherichia coli, GI1787408, Length=134, Percent_Identity=99.2537313432836, Blast_Score=276, Evalue=2e-76,
Organism=Escherichia coli, GI87081931, Length=134, Percent_Identity=44.0298507462687, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI87081758, Length=130, Percent_Identity=44.6153846153846, Blast_Score=123, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009833
- ProDom:   PD021249 [H]

Pfam domain/function: PF07166 DUF1398 [H]

EC number: NA

Molecular weight: Translated: 15822; Mature: 15822

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCEEEEEECCEEEEEECCC
NLLKVSTTKNPAKIKEAALLHIRGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT
CEEEEECCCCCHHHHHEEEEEEECCHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCE
LLYIEDVENNKPLI
EEEEEECCCCCCCC
>Mature Secondary Structure
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCEEEEEECCEEEEEECCC
NLLKVSTTKNPAKIKEAALLHIRGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT
CEEEEECCCCCHHHHHEEEEEEECCHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCE
LLYIEDVENNKPLI
EEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]