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The map label for this gene is ymfB [H]

Identifier: 218689087

GI number: 218689087

Start: 1279812

End: 1280273

Strand: Reverse

Name: ymfB [H]

Synonym: ECED1_1278

Alternate gene names: 218689087

Gene position: 1280273-1279812 (Counterclockwise)

Preceding gene: 218689088

Following gene: 218689086

Centisome position: 24.58

GC content: 50.87

Gene sequence:

>462_bases
ATGTTTAAACCGCACGTTACCGTTGCCTGCGTGGTGCACGCAGAAGGCAAATTTTTAGTCGTTGAAGAGACGATTAATGG
TAAAGCGTTATGGAACCAACCTGCCGGGCACCTGGAAGCCGATGAAACCTTAGTGGAAGCCGCCGCCCGTGAGCTGTGGG
AAGAAACCGGCATTAGCGCGCAGCCGCAACACTTTATTCGTATGCATCAGTGGATTGCGCCGGATAAAACGCCGTTTTTG
CGTTTCCTCTTTGCCATTGAGCTTGAGCAAATATGCCCGACGCAGCCTCATGACAGCGATATCGACTGCTGCCGTTGGGT
CAGCACCGAAGAAATTTTACAGGCGTCAAATCTTCGTTCGCCGCTGGTGGCGGAAAGTATTCGTTGTTATCAAAGCGGGC
AACGCTATCCGCTGGAGATGATTGGCGATTTTAACTGGCCTTTTACAAAGGGTGTCATCTAA

Upstream 100 bases:

>100_bases
TTTCCCCACGCTGCGACTGATTCGCTATGCGATGGGGGATTACTCTTTGGATAATCTTGCCAATGGCGAATGGCGAGACG
CGACAGATTAAGGATGCAAA

Downstream 100 bases:

>100_bases
AAGGCTGCGTGATAGAATACGCCGCCTTGAAGTTCAATGTCGTGAGTGATCCAATGTCTGAAACCGCAAAAAAAGTAATC
GTCGGCATGTCCGGCGGTGT

Product: bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFL
RFLFAIELEQICPTQPHDSDIDCCRWVSTEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI

Sequences:

>Translated_153_residues
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFL
RFLFAIELEQICPTQPHDSDIDCCRWVSTEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI
>Mature_153_residues
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFL
RFLFAIELEQICPTQPHDSDIDCCRWVSTEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=153, Percent_Identity=99.3464052287582, Blast_Score=318, Evalue=9e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17463; Mature: 17463

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISA
CCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
QPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSTEEILQASNLRS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHCCCC
PLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI
CHHHHHHHHHHCCCCCCHHHCCCCCCCHHCCCC
>Mature Secondary Structure
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISA
CCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
QPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSTEEILQASNLRS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHCCCC
PLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI
CHHHHHHHHHHCCCCCCHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA