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The map label for this gene is ycfZ [H]

Identifier: 218689073

GI number: 218689073

Start: 1266464

End: 1267252

Strand: Reverse

Name: ycfZ [H]

Synonym: ECED1_1264

Alternate gene names: 218689073

Gene position: 1267252-1266464 (Counterclockwise)

Preceding gene: 218689074

Following gene: 218689067

Centisome position: 24.33

GC content: 44.11

Gene sequence:

>789_bases
ATGAAAAAAATCATGATACTGCTCAGTTTACTGATGTTCCTGCCTCTGACGGCAATCAGTAAGCCCTTAATTCCAATAAT
GAAGACACTTTTTACGGATGTTACCGGTACTGTACCAGATGCTGAAGAGATCGCGCATAAAGCCGAACTTTTTCGCCAAC
AAACCGGAGTTGTACCGTTTATTGTGGTTTTACCCGACATTAATAATGAAGCCAGTCTCAGGCAAAATGGCAAAGCGATG
CTGGCGCATGCGGCATCTTCAATGAGTAATGTAAAAGGAAGTGTTCTGTTACTCTTTACTACCCGCGAGCCACGGTTAAT
TATGATAACCAACGGCCAGGTCGAAAGCAGTATGGACGATAAACATCTCGGCCTTCTGGTAGAAAATCACACGCTGGCTT
ATTTACATGCGGATCTCTGGTATCAGGGTATCAATAATGCATTGGCTGTTTTACAAGCACAGATATTAAAACAACCGACG
CCACCACTGACATATTATCCGCATCCCGGACAACAGCATGAAAATGATCCACCCGGCAGTACCACGACATTAGGCCTTTT
TGCCTGGGCAGTTGCATTCATCGTCTTTGCTGCATTTTTTAACTACACAACGCGCCTTTATTATGCGTTAAAATTTGCAG
TGGCGATGGCTGTTGCCAATATGGGTTATCAGGCTTTATGTTTGTATATCGATAACAGCTTTGCGATTACCAGAATATCG
CCACTCTGGGCAGGGCTGATTGGTGTCTGTACGTTTATTGCCGCGTTACTATGGACGAGTAAACGGTAA

Upstream 100 bases:

>100_bases
GGGGGTTTATCGGCATTATGGGCGTTATTTTTATCGCCGTCGGTTTATTAATCAGTATGCCCTCCTCTAAAAAGACACGC
AGGAAACGGAAGTCCCGCCC

Downstream 100 bases:

>100_bases
AAGAGGCAGTAAAGTTGCCGGATGCGGCGCGAACGCCTTATCCGGCCCACAAAACCCGCAAATTCAATTAATTTCGCCCC
TTCACAGGCCTGTCAAGCGT

Product: hypothetical protein

Products: nicotinate; N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKKIMILLSLLMFLPLTAISKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGVVPFIVVLPDINNEASLRQNGKAM
LAHAASSMSNVKGSVLLLFTTREPRLIMITNGQVESSMDDKHLGLLVENHTLAYLHADLWYQGINNALAVLQAQILKQPT
PPLTYYPHPGQQHENDPPGSTTTLGLFAWAVAFIVFAAFFNYTTRLYYALKFAVAMAVANMGYQALCLYIDNSFAITRIS
PLWAGLIGVCTFIAALLWTSKR

Sequences:

>Translated_262_residues
MKKIMILLSLLMFLPLTAISKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGVVPFIVVLPDINNEASLRQNGKAM
LAHAASSMSNVKGSVLLLFTTREPRLIMITNGQVESSMDDKHLGLLVENHTLAYLHADLWYQGINNALAVLQAQILKQPT
PPLTYYPHPGQQHENDPPGSTTTLGLFAWAVAFIVFAAFFNYTTRLYYALKFAVAMAVANMGYQALCLYIDNSFAITRIS
PLWAGLIGVCTFIAALLWTSKR
>Mature_262_residues
MKKIMILLSLLMFLPLTAISKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGVVPFIVVLPDINNEASLRQNGKAM
LAHAASSMSNVKGSVLLLFTTREPRLIMITNGQVESSMDDKHLGLLVENHTLAYLHADLWYQGINNALAVLQAQILKQPT
PPLTYYPHPGQQHENDPPGSTTTLGLFAWAVAFIVFAAFFNYTTRLYYALKFAVAMAVANMGYQALCLYIDNSFAITRIS
PLWAGLIGVCTFIAALLWTSKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787365, Length=262, Percent_Identity=88.1679389312977, Blast_Score=460, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.2.21

Molecular weight: Translated: 28969; Mature: 28969

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIMILLSLLMFLPLTAISKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGVVPF
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
IVVLPDINNEASLRQNGKAMLAHAASSMSNVKGSVLLLFTTREPRLIMITNGQVESSMDD
EEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCC
KHLGLLVENHTLAYLHADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENDPPGS
CCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC
TTTLGLFAWAVAFIVFAAFFNYTTRLYYALKFAVAMAVANMGYQALCLYIDNSFAITRIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEHH
PLWAGLIGVCTFIAALLWTSKR
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIMILLSLLMFLPLTAISKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGVVPF
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
IVVLPDINNEASLRQNGKAMLAHAASSMSNVKGSVLLLFTTREPRLIMITNGQVESSMDD
EEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCC
KHLGLLVENHTLAYLHADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENDPPGS
CCEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC
TTTLGLFAWAVAFIVFAAFFNYTTRLYYALKFAVAMAVANMGYQALCLYIDNSFAITRIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEHH
PLWAGLIGVCTFIAALLWTSKR
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-nicotinate D-ribonucleotide; dimethylbenzimidazole

Specific reaction: beta-nicotinate D-ribonucleotide + dimethylbenzimidazole = nicotinate + N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]