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The map label for this gene is ycfR [H]

Identifier: 218689064

GI number: 218689064

Start: 1255070

End: 1255327

Strand: Direct

Name: ycfR [H]

Synonym: ECED1_1255

Alternate gene names: 218689064

Gene position: 1255070-1255327 (Clockwise)

Preceding gene: 218689062

Following gene: 218689068

Centisome position: 24.09

GC content: 46.9

Gene sequence:

>258_bases
ATGAAAAACGTAAAAAACCTCATCGCTGCGGCGATTTTAAGCTCCATGTCATTTGCCAGCTTTGCGGCTGTCGAAGTTCA
GTCCACGCCAGAAGGCCAACAAAAAGTCGGTACTATCAGTGCTAACGCGGGGACAAATCTGGGATCGCTGGAAGAGCAGT
TGGCGCAAAAAGCGGATGAGATGGGCGCAAAATCTTTCCGTATTACTTCTGTAACCGGTCCGAATACCCTCCATGGAACA
GCAGTAATTTATAAATAA

Upstream 100 bases:

>100_bases
TAAAAAATATCTTGTATGTGATCCAGATCACATCTATCATTTAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTC
ATCTGCATAAGGCCACTATT

Downstream 100 bases:

>100_bases
GCATTAACCCTCATTAATGCCTGCTACTGCTTGTTTTTTTCCCCGCGACATGCCGTGTCGCGGGGATTTTTTTATCCGAG
CTTTACAGAGTTTGTGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKNVKNLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGT
AVIYK

Sequences:

>Translated_85_residues
MKNVKNLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGT
AVIYK
>Mature_85_residues
MKNVKNLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGT
AVIYK

Specific function: May be involved in the regulation of biofilm formation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI1787355, Length=85, Percent_Identity=98.8235294117647, Blast_Score=169, Evalue=4e-44,
Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=41.8604651162791, Blast_Score=66, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 8828; Mature: 8828

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVKNLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADE
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHH
MGAKSFRITSVTGPNTLHGTAVIYK
CCCCCEEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MKNVKNLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADE
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHH
MGAKSFRITSVTGPNTLHGTAVIYK
CCCCCEEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]