| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is thiK [H]
Identifier: 218689058
GI number: 218689058
Start: 1249241
End: 1250065
Strand: Direct
Name: thiK [H]
Synonym: ECED1_1249
Alternate gene names: 218689058
Gene position: 1249241-1250065 (Clockwise)
Preceding gene: 218689057
Following gene: 218689059
Centisome position: 23.98
GC content: 53.58
Gene sequence:
>825_bases GTGCCGTTTCGCAGCAATAATCCCCTCACGCGCGACGAATTGCTGTCGCGCTTTTTCCCGCAGTTTCATCCCGTCACGAC GTTTAATAGTGGGCTTAGTGGCGGGAGTTTTCTCATTGAACATCAGGGCCAGCGTTTTGTTGTGCGTCAGCCGCACGATC CTGATGCGCCGCAGTCCGCGTTCTTGCGCCAGTATCGGGCTTTATCACAACTACCCGCATGCATTGCACCGAAGCCGCAT TTATATCTCCGTGACTGGATGGTGGTCGACTATCTGCCCGGCGAGGTAAAAACGTATTTGCCGGATACCAACGAACTGGC AGGCTTGCTGTATTATCTACATCAACAACCGCGTTTTGGCTGGCGAATAACGCTGTTGCCGTTACTGGAACTGTACTGGC AGCAAAGCGATCCGGCGCGGCGGACAGTGGGTTGGCTGCGAATGTTAAAACGTCTGCGCAAAGCGCGGGAACCACGGCTT TTACGCTTAAGTCCATTGCATATGGATGTCCACGCCGGAAATTTAGTGCATAGCGCGCCAGGGTTAAAACTCATCGACTG GGAGTATGCCGGAGATGGTGATATCGCGCTGGAACTGGCGGCGGTGTGGGTGGAAAATACTGACCAGCATCGGCAATTGG TCAATGACTATGCCACTCGCGCGAAGATTTATCCGGCGCAATTATGGCGTCAGGTCAGGCGATGGTTTCCCTGGCTGCTG ATGCTCAAAGCAGGGTGGTTTGAGTACCGCTGGCGACAAACCGGCGATCAACAATTTATCAGGCTGGCCGATGACACCTG GCGGCAGCTATTAATAAAACAATAA
Upstream 100 bases:
>100_bases TACGTGCTGTACTCCAGCGCCTCTGGCAACGTTAACGCTCCGACCCTACAAATGCAGCTGATGCTGGTGCAGACGGGCGA AATTATCTGGTCAGGTAAAG
Downstream 100 bases:
>100_bases GGAGAGCAGTGTGGGTCCAGTAATGTTGGATGTCGAAGGTTACGAACTGGACGCGGAAGAGCGTGAAATACTGGCGCATC CGCTGGTGGGAGGGCTGATT
Product: thiamine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPH LYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRL LRLSPLHMDVHAGNLVHSAPGLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ
Sequences:
>Translated_274_residues MPFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPH LYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRL LRLSPLHMDVHAGNLVHSAPGLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ >Mature_273_residues PFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPHL YLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRLL RLSPLHMDVHAGNLVHSAPGLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLM LKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ
Specific function: Catalyzes the phosphorylation of thiamine to thiamine phosphate [H]
COG id: COG0510
COG function: function code M; Predicted choline kinase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine kinase family [H]
Homologues:
Organism=Escherichia coli, GI1787349, Length=274, Percent_Identity=97.8102189781022, Blast_Score=547, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014093 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.89 [H]
Molecular weight: Translated: 32452; Mature: 32321
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSA CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHH FLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFG HHHHHHHHHHCCHHCCCCCCEEEECEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCC WRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRLLRLSPLHMDVHAGNLVHSAP EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEECCC GLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL CCEEEEEEECCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSA CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHH FLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFG HHHHHHHHHHCCHHCCCCCCEEEECEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCC WRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRLLRLSPLHMDVHAGNLVHSAP EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEECCC GLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL CCEEEEEEECCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA