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The map label for this gene is flgC

Identifier: 218689027

GI number: 218689027

Start: 1217424

End: 1217828

Strand: Direct

Name: flgC

Synonym: ECED1_1218

Alternate gene names: 218689027

Gene position: 1217424-1217828 (Clockwise)

Preceding gene: 218689026

Following gene: 218689028

Centisome position: 23.37

GC content: 53.09

Gene sequence:

>405_bases
ATGGCACTGCTGAATATTTTTGATATCGCCGGGTCGGCGTTAACTGCCCAGTCCCAGCGCCTGAACGTGGCGGCCAGTAA
TCTGGCGAATGCTGATAGCGTCACCGGTCCCGATGGACAGCCATATCGGGCAAAACAGGTGGTATTCCAGGTTAACGCTG
CGCCAGGTGCTGCGACAGGCGGCGTAAAGGTTGCCGATGTTATAGAAAGTCAGGCTCCGGACAAACTGGTTTATGAACCG
GGTAATCCGCTGGCGGATGCAAAGGGCTACGTGAAAATGCCAAACGTTGATGTCGTCGGAGAGATGGTTAACACCATGTC
GGCGTCACGCAGTTATCAGGCCAATGTTGAAGTGCTCAACACGGTGAAAAGCATGATGCTGAAAACCCTTACGCTCGGTC
AATAA

Upstream 100 bases:

>100_bases
CCAGTTTGCCGATAACAGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAGATCAAAGGCATGATGAACGTTT
TACAGAGCGGAAATTAACGG

Downstream 100 bases:

>100_bases
AGGAGAAAGCTATGTCTATTGCGGTAACCACCACCGATCCGACGAATACCGGCGTCAGTACCACCAGCAGTAGTTCGCTC
ACGGGCAGCAACGCCGCAGA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEP
GNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ

Sequences:

>Translated_134_residues
MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEP
GNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ
>Mature_133_residues
ALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPG
NPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family

Homologues:

Organism=Escherichia coli, GI1787314, Length=134, Percent_Identity=100, Blast_Score=268, Evalue=1e-73,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGC_ECO57 (P0ABX4)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D90810
- PIR:   H85669
- RefSeq:   NP_287208.1
- RefSeq:   NP_309479.1
- ProteinModelPortal:   P0ABX4
- SMR:   P0ABX4
- EnsemblBacteria:   EBESCT00000027613
- EnsemblBacteria:   EBESCT00000058250
- GeneID:   913368
- GeneID:   959415
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1712
- KEGG:   ecs:ECs1452
- GeneTree:   EBGT00050000010491
- HOGENOM:   HBG700631
- OMA:   DKVVRDD
- ProtClustDB:   PRK05681
- BioCyc:   ECOL83334:ECS1452-MONOMER
- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299
- TIGRFAMs:   TIGR01395

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod

EC number: NA

Molecular weight: Translated: 13968; Mature: 13837

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG
CCEEEEEHHCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN
CCHHHHHHHCCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHH
TVKSMMLKTLTLGQ
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG
CEEEEEHHCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN
CCHHHHHHHCCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHH
TVKSMMLKTLTLGQ
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796