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The map label for this gene is stfR [C]

Identifier: 218688947

GI number: 218688947

Start: 1138002

End: 1139702

Strand: Direct

Name: stfR [C]

Synonym: ECED1_1138

Alternate gene names: 218688947

Gene position: 1138002-1139702 (Clockwise)

Preceding gene: 218688946

Following gene: 218688948

Centisome position: 21.84

GC content: 58.85

Gene sequence:

>1701_bases
GTGAGTGTTGTTGTTTCGGGGACGCTGAAATCTCCTGATGGTGAGGCGATATCAGGCGCAAATATTACCCTGACGGCGCT
GACAGTTTCACCGGATGCGCTCAGCGGCACCAGTGCGTCAGCAGTGACTCGTGACGGCGGGTATTACGGAATGACGCTGG
AGCCGGGGGAGTATGCGGTTTCTGTGACGGTGAAAGGGAAGACTGCTGTCTACGGACGTGTGCGTATTGAGGGGACTGAA
AGTACGGTGACGCTCAATATGCTGTTACGGCGTAGTCTTGTTGAGGTGAGCATACCCGGAGAACTGCTGACAGATTTCCG
GCAGATACAGAACAATGTGGCGGATGACCTTGCCACGATTCGTCGTCTGAACGAAGACACGGCGGTGAAAAATAATCAGG
CTTCACAGTCGAAGGAAAGCGCTGCTGCCAGTGCGAAGACTGCATCAGAAAGCGCGAAGGCTGCGACAAGCAAAGCGACG
GAGTCTGCACAAAAAGCCAGTGAGGCTGCAGAGGCGGCGACCCGGGCAGGTGAGTCTGAAAAGGCAGCGGCAGCAGACGC
GAAAGAGGCCAGACAACATGCTGAAACCGCCAGAGTGGCTCAGGAGGCCGCCGGAGACGTTCTTAAACGTGCTGAGGCTG
CTACGGTTAGTGCTGAAGAAGCCAGACGTATGGCTGAGAATGCACGAGGACCTAAAGGCGATACAGGGCCGAAAGGTGAT
GCTGGTCCTCGTGGTGAAACAGGTCCGGCGGGTCCGCGTGGGGAGAAAGGTGAGCAGGGAGAGCGCGGACCTCAGGGACC
TCGTGGGGAGCCAGGCCCGGCGGGCAGCGCAGCAAATGTGGCAGATGCGACGACGGCACAGAAGGGAATTGTGCAGTTAA
GCAGCGCAACGGACAGTGATGATGAAACGAAGGCAGCCACACCGAAAGCTGTGAAGGCGGCAATGGATGAGGCCAGGGCA
GCGAAACAGAAGGCAGAAGAGGTTGCGACAACCCGCCCGTCGGGAGAAAGCATACCTGGACCGAAAGGTGACAGGGGCGA
GCAAGGACCGGCAGGTCCCACAGGTCCGAAAGGTGAGCGCGGTGAACCCGGACCTCAGGGGCCTGCAGGACAGAAAGGTG
AGCAGGGCCTCCGTGGGCTGCAGGGGGCGACAGGACCTGCGGGAGCAGTGGGGCCCGCAGGCCCACAGGGACCGGCTGGT
GCAGCTGGTCCCAAAGGTGATGCAGGCCCGGCAGGGCCACGAGGTGAAAGGGGACCAGCGGGGGCACAGGGTGTTCCGGG
GCCGGTTGGTCCGGCAGGTCCTGCGGGTAAAACGGGGCCACGAGGTTTGCAGGGAGAAACAGGAAGACAGGGCCCGACAG
GTCCACAGGGACCGACAGGTGAAACCGGACCACAGGGACCACAAGGGCCAACCGGAAGGCTGGTACCCGGGGAAATTTAC
AGCATCGGAACATACATTATTGCCGCACTAGGCCCGTATATAACCGACATCGGCAGAACCTATCAGCCAGGAGAAACTGT
ATCGGGTTCACGCCTTAAGCGATGCGCCCTAATCAAAGACGAAAACGGAAACTATATGAAAGCTAACACCGATGGCATTG
ACGGCAACCTATCCTCAGTTCCGGGCTCATGGATGGTGTGTAATGAAATTACGTCGACAAATGACAATGAAGGCATCGGG
CTGTTCCAGCGCGCATACTGA

Upstream 100 bases:

>100_bases
CAGCACAACATTATCAGAGTTTTGTTGAGCAGCTCGGGATTAAACAGGGTGCAGACAGTGCATTGTCTGCCCGCAAGAAG
GTGTTTAACGGAGGTGGAAT

Downstream 100 bases:

>100_bases
CAGACAGGAGATGACATGAATGTGGAAAAAAATAAGCAATCCGCAATGGGCAGATAAAGATCACACTGCTGTCAATTGCA
TGGTGAAGTTTGAGCACATT

Product: hypothetical protein

Products: NA

Alternate protein names: Tail Fiber Protein

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MSVVVSGTLKSPDGEAISGANITLTALTVSPDALSGTSASAVTRDGGYYGMTLEPGEYAVSVTVKGKTAVYGRVRIEGTE
STVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATIRRLNEDTAVKNNQASQSKESAAASAKTASESAKAATSKAT
ESAQKASEAAEAATRAGESEKAAAADAKEARQHAETARVAQEAAGDVLKRAEAATVSAEEARRMAENARGPKGDTGPKGD
AGPRGETGPAGPRGEKGEQGERGPQGPRGEPGPAGSAANVADATTAQKGIVQLSSATDSDDETKAATPKAVKAAMDEARA
AKQKAEEVATTRPSGESIPGPKGDRGEQGPAGPTGPKGERGEPGPQGPAGQKGEQGLRGLQGATGPAGAVGPAGPQGPAG
AAGPKGDAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGETGPQGPQGPTGRLVPGEIY
SIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSVPGSWMVCNEITSTNDNEGIG
LFQRAY

Sequences:

>Translated_566_residues
MSVVVSGTLKSPDGEAISGANITLTALTVSPDALSGTSASAVTRDGGYYGMTLEPGEYAVSVTVKGKTAVYGRVRIEGTE
STVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATIRRLNEDTAVKNNQASQSKESAAASAKTASESAKAATSKAT
ESAQKASEAAEAATRAGESEKAAAADAKEARQHAETARVAQEAAGDVLKRAEAATVSAEEARRMAENARGPKGDTGPKGD
AGPRGETGPAGPRGEKGEQGERGPQGPRGEPGPAGSAANVADATTAQKGIVQLSSATDSDDETKAATPKAVKAAMDEARA
AKQKAEEVATTRPSGESIPGPKGDRGEQGPAGPTGPKGERGEPGPQGPAGQKGEQGLRGLQGATGPAGAVGPAGPQGPAG
AAGPKGDAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGETGPQGPQGPTGRLVPGEIY
SIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSVPGSWMVCNEITSTNDNEGIG
LFQRAY
>Mature_565_residues
SVVVSGTLKSPDGEAISGANITLTALTVSPDALSGTSASAVTRDGGYYGMTLEPGEYAVSVTVKGKTAVYGRVRIEGTES
TVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATIRRLNEDTAVKNNQASQSKESAAASAKTASESAKAATSKATE
SAQKASEAAEAATRAGESEKAAAADAKEARQHAETARVAQEAAGDVLKRAEAATVSAEEARRMAENARGPKGDTGPKGDA
GPRGETGPAGPRGEKGEQGERGPQGPRGEPGPAGSAANVADATTAQKGIVQLSSATDSDDETKAATPKAVKAAMDEARAA
KQKAEEVATTRPSGESIPGPKGDRGEQGPAGPTGPKGERGEPGPQGPAGQKGEQGLRGLQGATGPAGAVGPAGPQGPAGA
AGPKGDAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGETGPQGPQGPTGRLVPGEIYS
IGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSVPGSWMVCNEITSTNDNEGIGL
FQRAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI183583553, Length=248, Percent_Identity=35.8870967741936, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI98985806, Length=270, Percent_Identity=34.0740740740741, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI98985810, Length=270, Percent_Identity=34.0740740740741, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI299523257, Length=270, Percent_Identity=34.0740740740741, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI48762934, Length=285, Percent_Identity=37.5438596491228, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI115392133, Length=228, Percent_Identity=37.719298245614, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI115527062, Length=279, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI299523253, Length=270, Percent_Identity=34.0740740740741, Blast_Score=83, Evalue=9e-16,
Organism=Homo sapiens, GI56847616, Length=168, Percent_Identity=42.2619047619048, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI89363017, Length=252, Percent_Identity=36.9047619047619, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI65301115, Length=168, Percent_Identity=42.2619047619048, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI115527066, Length=279, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI32140760, Length=263, Percent_Identity=36.1216730038023, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI5803080, Length=239, Percent_Identity=35.1464435146443, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI115527070, Length=279, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI154759255, Length=275, Percent_Identity=34.9090909090909, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI110735435, Length=272, Percent_Identity=35.6617647058824, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI4502961, Length=241, Percent_Identity=36.9294605809129, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI156616290, Length=317, Percent_Identity=28.391167192429, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI119829187, Length=199, Percent_Identity=37.6884422110553, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI122937273, Length=245, Percent_Identity=38.7755102040816, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI111118970, Length=283, Percent_Identity=35.3356890459364, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI145701009, Length=197, Percent_Identity=34.010152284264, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI111118968, Length=278, Percent_Identity=35.2517985611511, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI18105018, Length=134, Percent_Identity=41.044776119403, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI18105016, Length=134, Percent_Identity=41.044776119403, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI111118972, Length=278, Percent_Identity=35.2517985611511, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI18780273, Length=133, Percent_Identity=43.609022556391, Blast_Score=68, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992048, Length=259, Percent_Identity=37.0656370656371, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17569903, Length=265, Percent_Identity=35.0943396226415, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17535735, Length=148, Percent_Identity=44.5945945945946, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17137252, Length=274, Percent_Identity=35.4014598540146, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581820, Length=257, Percent_Identity=38.1322957198444, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581822, Length=257, Percent_Identity=38.1322957198444, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581824, Length=257, Percent_Identity=38.1322957198444, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56648; Mature: 56517

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVVSGTLKSPDGEAISGANITLTALTVSPDALSGTSASAVTRDGGYYGMTLEPGEYAV
CEEEEECCCCCCCCCEECCCCEEEEEEEECCCCCCCCCCHHEECCCCEEEEEECCCCEEE
SVTVKGKTAVYGRVRIEGTESTVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATI
EEEECCCEEEEEEEEEECCCCEEHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHH
RRLNEDTAVKNNQASQSKESAAASAKTASESAKAATSKATESAQKASEAAEAATRAGESE
HHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KAAAADAKEARQHAETARVAQEAAGDVLKRAEAATVSAEEARRMAENARGPKGDTGPKGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC
AGPRGETGPAGPRGEKGEQGERGPQGPRGEPGPAGSAANVADATTAQKGIVQLSSATDSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCC
DETKAATPKAVKAAMDEARAAKQKAEEVATTRPSGESIPGPKGDRGEQGPAGPTGPKGER
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GEPGPQGPAGQKGEQGLRGLQGATGPAGAVGPAGPQGPAGAAGPKGDAGPAGPRGERGPA
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGETGPQGPQGPTGRLVPGEIY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
SIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEECCCCCEEECCCCCCCCCCCCC
PGSWMVCNEITSTNDNEGIGLFQRAY
CCCEEEECCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SVVVSGTLKSPDGEAISGANITLTALTVSPDALSGTSASAVTRDGGYYGMTLEPGEYAV
EEEEECCCCCCCCCEECCCCEEEEEEEECCCCCCCCCCHHEECCCCEEEEEECCCCEEE
SVTVKGKTAVYGRVRIEGTESTVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATI
EEEECCCEEEEEEEEEECCCCEEHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHH
RRLNEDTAVKNNQASQSKESAAASAKTASESAKAATSKATESAQKASEAAEAATRAGESE
HHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KAAAADAKEARQHAETARVAQEAAGDVLKRAEAATVSAEEARRMAENARGPKGDTGPKGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC
AGPRGETGPAGPRGEKGEQGERGPQGPRGEPGPAGSAANVADATTAQKGIVQLSSATDSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCC
DETKAATPKAVKAAMDEARAAKQKAEEVATTRPSGESIPGPKGDRGEQGPAGPTGPKGER
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GEPGPQGPAGQKGEQGLRGLQGATGPAGAVGPAGPQGPAGAAGPKGDAGPAGPRGERGPA
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGETGPQGPQGPTGRLVPGEIY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
SIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANTDGIDGNLSSV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEECCCCCEEECCCCCCCCCCCCC
PGSWMVCNEITSTNDNEGIGLFQRAY
CCCEEEECCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA