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The map label for this gene is rz [H]

Identifier: 218688936

GI number: 218688936

Start: 1127339

End: 1127806

Strand: Direct

Name: rz [H]

Synonym: ECED1_1127

Alternate gene names: 218688936

Gene position: 1127339-1127806 (Clockwise)

Preceding gene: 218688935

Following gene: 218688937

Centisome position: 21.64

GC content: 55.56

Gene sequence:

>468_bases
ATGAGCCGTGTTCTGTGTGTGGTGATTATTGTCCTGGCGGGTGGCTGTGGTGCGCTGTGGCTGGCAACAGACCATTACCG
CGATAACGCCATCACCTACAAAGCGCAGCGCGATAAAAAAGCCAGAGAGCTGGAGCTGGCAAACGCCACCATTACTGATA
TGCAGGTGCGCCAGCGCGATGTTGCTGCGCTCGATGCAAAATACTCGAGGGAATTAGCCGATGCGAGAGCTGAAAATGAA
ACTCTGCGTGCTGATGTTGCTGCTGGTCGTAAGCGCCTGCGGATCAACGCCACCTGCTCCGGTACCGTGCGTGAAGCCAC
CGGCACCTCCGGCATGGATAATGCAACCGGCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCATCCTCAGAGAAC
GGTTGATGACAATGCAGAAGCAGCTGGAAGGGGCACAGGAATATATCCGCACTCAGTGCCTGAATTAA

Upstream 100 bases:

>100_bases
GTAATTGTCGGCATTTCATTTTCACTCATGCTGGTTGCCATTTTCTTTTCCACCGCCTGGCGAGTCCTGACGTTATCGGG
ACTGGTGGGGTGAAAGAGAG

Downstream 100 bases:

>100_bases
CAGAGCCAGCTTAATCGCTGGCTTTTTCATATCTGAATTTCATCGCGCATCTCACGCGCATATCACATCCCCGAGCCTTT
CAGAAAGTTGAGCCTGAGAA

Product: Endopeptidase (Lysis protein) from bacteriophage origin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSRVLCVVIIVLAGGCGALWLATDHYRDNAITYKAQRDKKARELELANATITDMQVRQRDVAALDAKYSRELADARAENE
TLRADVAAGRKRLRINATCSGTVREATGTSGMDNATGPRLADTAERDYFILRERLMTMQKQLEGAQEYIRTQCLN

Sequences:

>Translated_155_residues
MSRVLCVVIIVLAGGCGALWLATDHYRDNAITYKAQRDKKARELELANATITDMQVRQRDVAALDAKYSRELADARAENE
TLRADVAAGRKRLRINATCSGTVREATGTSGMDNATGPRLADTAERDYFILRERLMTMQKQLEGAQEYIRTQCLN
>Mature_154_residues
SRVLCVVIIVLAGGCGALWLATDHYRDNAITYKAQRDKKARELELANATITDMQVRQRDVAALDAKYSRELADARAENET
LRADVAAGRKRLRINATCSGTVREATGTSGMDNATGPRLADTAERDYFILRERLMTMQKQLEGAQEYIRTQCLN

Specific function: Necessary for host cell lysis. It is believed to code for an endopeptidase that cleaves the amino-carboxyl cross-link between the diaminopimelic acid and D-alanine residues in the murein component of the bacterial cell wall [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786769, Length=153, Percent_Identity=68.6274509803922, Blast_Score=205, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004929 [H]

Pfam domain/function: PF03245 Phage_lysis [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 17283; Mature: 17152

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVLCVVIIVLAGGCGALWLATDHYRDNAITYKAQRDKKARELELANATITDMQVRQRD
CCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHCCCHHHHHHHCCCCHHHHHHHHHH
VAALDAKYSRELADARAENETLRADVAAGRKRLRINATCSGTVREATGTSGMDNATGPRL
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCC
ADTAERDYFILRERLMTMQKQLEGAQEYIRTQCLN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRVLCVVIIVLAGGCGALWLATDHYRDNAITYKAQRDKKARELELANATITDMQVRQRD
CHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHCCCHHHHHHHCCCCHHHHHHHHHH
VAALDAKYSRELADARAENETLRADVAAGRKRLRINATCSGTVREATGTSGMDNATGPRL
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCC
ADTAERDYFILRERLMTMQKQLEGAQEYIRTQCLN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]