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The map label for this gene is ninB [H]

Identifier: 218688921

GI number: 218688921

Start: 1119624

End: 1120034

Strand: Direct

Name: ninB [H]

Synonym: ECED1_1112

Alternate gene names: 218688921

Gene position: 1119624-1120034 (Clockwise)

Preceding gene: 218688920

Following gene: 218688922

Centisome position: 21.49

GC content: 47.93

Gene sequence:

>411_bases
ATGAACCAGACTATCTTCCTCCGAAGTAAGCAGCAGCAACAATTCGCCATTAACGCCATCCTTGCAACAACTCTCGATAA
AGACAAACCCGTTACGATCCGTATCACCGATTACAAGCGTAATCTCGCTCAAAATGCAAAATTTCACGCGATGGTCGCTG
ATATATCCCGCCAGGTTAAGTGGTGCGGCAGGTGGCTAAAACCAGAACAGTGGAAAGTTTTGTTAATCAGCGGTCATGCC
GTGGCGACAAAACAGGAAGCTGATGTTTTGCCAGGTCTTGAAGGTGAATACGTCAATATCCGCGAAAGCAGTGCGCAGAT
GAGCGTGAAGCGTATGGCAAGCCTGATTGAGTACACAACTTCCTGGGCTGTGGATCAGGGTGTCAGATTTACCGACAGGA
GGTATGAATGA

Upstream 100 bases:

>100_bases
CATGCCAATGCTGGAAAGCCTGCGGGCAAGACAATTTGAATTCTGAAACTAAAGGAGCTTCGGCTCCTTTTTTGTTGGGA
AAATCCAGTGAGAGGGAATA

Downstream 100 bases:

>100_bases
GACGACAGCGACGAAGCATCACCGATATCGTCTGTGAAAACTGCAATTACCTTCCAACCAAACGCTCCCGAAATAAACCC
AGGCCAGTCCCCAAAGAATC

Product: putative ninB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNQTIFLRSKQQQQFAINAILATTLDKDKPVTIRITDYKRNLAQNAKFHAMVADISRQVKWCGRWLKPEQWKVLLISGHA
VATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTTSWAVDQGVRFTDRRYE

Sequences:

>Translated_136_residues
MNQTIFLRSKQQQQFAINAILATTLDKDKPVTIRITDYKRNLAQNAKFHAMVADISRQVKWCGRWLKPEQWKVLLISGHA
VATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTTSWAVDQGVRFTDRRYE
>Mature_136_residues
MNQTIFLRSKQQQQFAINAILATTLDKDKPVTIRITDYKRNLAQNAKFHAMVADISRQVKWCGRWLKPEQWKVLLISGHA
VATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTTSWAVDQGVRFTDRRYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 15688; Mature: 15688

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTIFLRSKQQQQFAINAILATTLDKDKPVTIRITDYKRNLAQNAKFHAMVADISRQVK
CCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHH
WCGRWLKPEQWKVLLISGHAVATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTT
HHHCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
SWAVDQGVRFTDRRYE
HHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNQTIFLRSKQQQQFAINAILATTLDKDKPVTIRITDYKRNLAQNAKFHAMVADISRQVK
CCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHH
WCGRWLKPEQWKVLLISGHAVATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTT
HHHCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
SWAVDQGVRFTDRRYE
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]