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The map label for this gene is ydfA [H]

Identifier: 218688815

GI number: 218688815

Start: 1034383

End: 1034616

Strand: Reverse

Name: ydfA [H]

Synonym: ECED1_1002

Alternate gene names: 218688815

Gene position: 1034616-1034383 (Counterclockwise)

Preceding gene: 218688816

Following gene: 218688814

Centisome position: 19.86

GC content: 49.57

Gene sequence:

>234_bases
ATGACGGCAGGGTTCAACTTTAATAACTATGCAGCAGGTTTTTGTTCCGCTACCCCGGCGTTAAGGGGAAATGAGGTCAG
CATGGATACTATCGATCTTGGCAACAGCGAATCTCTGGTATGTGGCGTGTTCCCCAACCAGGACGGTACGTTTACCGCGA
TGACGTATACCAGAAGCAAAACGTTTAAAACTGAAGCTGGCGCGCGTCGCTGGTTAACCAGAAACACTGACTGA

Upstream 100 bases:

>100_bases
TTGTTTATTCATCACCCACCCTCCCCACAGAACGCAGGGCAATACTTCGAGTTACCAGGCAGTGGTCAGGGGGTAAGTAG
CCAGCCCGAGGCGTAAGAAC

Downstream 100 bases:

>100_bases
TGAGGTTGACGATGGAATTTAAAGATTTACCTCCTTCAATCCAGGAGATTGCAGCACACACACTTCGTCATCGTCTGAAC
GAACTTGAATTGGAATCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MTAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTEAGARRWLTRNTD

Sequences:

>Translated_77_residues
MTAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTEAGARRWLTRNTD
>Mature_76_residues
TAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTEAGARRWLTRNTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydaF [H]

Homologues:

Organism=Escherichia coli, GI1787854, Length=49, Percent_Identity=87.7551020408163, Blast_Score=92, Evalue=5e-21,
Organism=Escherichia coli, GI87081886, Length=49, Percent_Identity=83.6734693877551, Blast_Score=92, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009821
- ProDom:   PD019047 [H]

Pfam domain/function: PF07151 DUF1391 [H]

EC number: NA

Molecular weight: Translated: 8398; Mature: 8267

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSK
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCC
TFKTEAGARRWLTRNTD
CEECCCCCCCCEECCCC
>Mature Secondary Structure 
TAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCC
TFKTEAGARRWLTRNTD
CEECCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]