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The map label for this gene is intE [C]

Identifier: 218688807

GI number: 218688807

Start: 1029028

End: 1030047

Strand: Reverse

Name: intE [C]

Synonym: ECED1_0994

Alternate gene names: 218688807

Gene position: 1030047-1029028 (Counterclockwise)

Preceding gene: 218688808

Following gene: 218688806

Centisome position: 19.77

GC content: 44.31

Gene sequence:

>1020_bases
ATGGGAAGACCAAGAAAAAATAAAAAAGATAATGTACTGCCACCGCGGGTTAGATCGAATGGTTACAGTTACGTGTGGAA
ACCAGAAGGAAGTACAAGAACTATAGGGCTAGGAAGAGTGCGGAAAACCAGCGTAGCTAAAGTCTGGCAAAATTATGAAC
TGGAAAAAGCAAAACTCCACAACATAATGACCGTAGCTAAATTATGGCACATGTTTATGGACTCCCCTGCATTTACAGAA
CTGGCCCCCCGAACCCAAAAAGATTATCGACAACATCAGAAGGCGTTGCTGATGGTATTCGGAAAAGTGCTTGCTGATAA
TGTCAAAACTGAGCAGGTAAGAATTTTCATGGATAAACGAGGGCTTGAGAGCAAGACCCAGGCAAATCATGAACTGGCAA
GCCTGAGTCGAGTATACGGGTGGGGATATGAGCGTGGATACGTGAAGAATAACCCATGTAAAGGAGTCAGAAAATTCTCT
CTTAAAGCCCGCACTGTTTACATCACCGATGAACAGTATGCAGCGATATATGCGGAAGCAATTCCACAGTTACGCATTGC
AATGGAGATTTCCTATCTCTGTGCGGCAAGGCTCGGTGATGTGCTTGAGTTGAAATGGCAGGATATTATGGATAAAGGGA
TCTACATTGAGCAAAACAAAACCGGCACCAAACAAATCAAGGAATGGTCACCGCGATTACGTACAGCGATCCAGTTAGCC
CGAAATGTATCTTCCTGTACATGCGAATATGTGATCAATACAACCAAAGGCGGGAAAGTCATAGCTAAAACGCTGAACAA
CTGGTGGAATCAGGCTAAACGCTCAGCCGAGCAAAAAGTTGGCGTTCCGTTCGGGTGCAATTTTCACGACATAAAAGCCA
AGGGGATCTCAGATTACGAAGGCAGCAGTCGCGACAAACAAATTTTCAGCGGGCATAAAACAGAAAATCAGGTGTTGATT
TACGATCGTAAAACAAAAATCACACCAACACTGGATCTGCCGCTCGTGGTTAGCAAGTAG

Upstream 100 bases:

>100_bases
GAACCAATAGTTCTACGCAGGGATATTCCACACGGACTGACAACGATGCCAAAAACATCTGAACTGGTTTCTGCTGAACC
CGATTTTGAGGCACTGAACA

Downstream 100 bases:

>100_bases
GCAATACAGAAAATTTTCTGGCAAAAATACTTGGTATACTAGCTATGAGCAACTTCCTAACACCTTGATTTTTCTTGGTG
TTAAATTTAATTAAATTTTC

Product: putative integrase from prophage

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Phage-Related Integrase; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Integrase Protein; Site-Specific Recombinase; Integrase Partial Gene; Prophage; Integrase Prophage; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MGRPRKNKKDNVLPPRVRSNGYSYVWKPEGSTRTIGLGRVRKTSVAKVWQNYELEKAKLHNIMTVAKLWHMFMDSPAFTE
LAPRTQKDYRQHQKALLMVFGKVLADNVKTEQVRIFMDKRGLESKTQANHELASLSRVYGWGYERGYVKNNPCKGVRKFS
LKARTVYITDEQYAAIYAEAIPQLRIAMEISYLCAARLGDVLELKWQDIMDKGIYIEQNKTGTKQIKEWSPRLRTAIQLA
RNVSSCTCEYVINTTKGGKVIAKTLNNWWNQAKRSAEQKVGVPFGCNFHDIKAKGISDYEGSSRDKQIFSGHKTENQVLI
YDRKTKITPTLDLPLVVSK

Sequences:

>Translated_339_residues
MGRPRKNKKDNVLPPRVRSNGYSYVWKPEGSTRTIGLGRVRKTSVAKVWQNYELEKAKLHNIMTVAKLWHMFMDSPAFTE
LAPRTQKDYRQHQKALLMVFGKVLADNVKTEQVRIFMDKRGLESKTQANHELASLSRVYGWGYERGYVKNNPCKGVRKFS
LKARTVYITDEQYAAIYAEAIPQLRIAMEISYLCAARLGDVLELKWQDIMDKGIYIEQNKTGTKQIKEWSPRLRTAIQLA
RNVSSCTCEYVINTTKGGKVIAKTLNNWWNQAKRSAEQKVGVPFGCNFHDIKAKGISDYEGSSRDKQIFSGHKTENQVLI
YDRKTKITPTLDLPLVVSK
>Mature_338_residues
GRPRKNKKDNVLPPRVRSNGYSYVWKPEGSTRTIGLGRVRKTSVAKVWQNYELEKAKLHNIMTVAKLWHMFMDSPAFTEL
APRTQKDYRQHQKALLMVFGKVLADNVKTEQVRIFMDKRGLESKTQANHELASLSRVYGWGYERGYVKNNPCKGVRKFSL
KARTVYITDEQYAAIYAEAIPQLRIAMEISYLCAARLGDVLELKWQDIMDKGIYIEQNKTGTKQIKEWSPRLRTAIQLAR
NVSSCTCEYVINTTKGGKVIAKTLNNWWNQAKRSAEQKVGVPFGCNFHDIKAKGISDYEGSSRDKQIFSGHKTENQVLIY
DRKTKITPTLDLPLVVSK

Specific function: Integrase From The Cryptic Lambdoic Prophage E14. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38900; Mature: 38769

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRPRKNKKDNVLPPRVRSNGYSYVWKPEGSTRTIGLGRVRKTSVAKVWQNYELEKAKLH
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHH
NIMTVAKLWHMFMDSPAFTELAPRTQKDYRQHQKALLMVFGKVLADNVKTEQVRIFMDKR
HHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
GLESKTQANHELASLSRVYGWGYERGYVKNNPCKGVRKFSLKARTVYITDEQYAAIYAEA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEEEEEEECCHHHHHHHHH
IPQLRIAMEISYLCAARLGDVLELKWQDIMDKGIYIEQNKTGTKQIKEWSPRLRTAIQLA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
RNVSSCTCEYVINTTKGGKVIAKTLNNWWNQAKRSAEQKVGVPFGCNFHDIKAKGISDYE
HCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCCCCC
GSSRDKQIFSGHKTENQVLIYDRKTKITPTLDLPLVVSK
CCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEECC
>Mature Secondary Structure 
GRPRKNKKDNVLPPRVRSNGYSYVWKPEGSTRTIGLGRVRKTSVAKVWQNYELEKAKLH
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHH
NIMTVAKLWHMFMDSPAFTELAPRTQKDYRQHQKALLMVFGKVLADNVKTEQVRIFMDKR
HHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
GLESKTQANHELASLSRVYGWGYERGYVKNNPCKGVRKFSLKARTVYITDEQYAAIYAEA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEEEEEEECCHHHHHHHHH
IPQLRIAMEISYLCAARLGDVLELKWQDIMDKGIYIEQNKTGTKQIKEWSPRLRTAIQLA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
RNVSSCTCEYVINTTKGGKVIAKTLNNWWNQAKRSAEQKVGVPFGCNFHDIKAKGISDYE
HCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCCCCC
GSSRDKQIFSGHKTENQVLIYDRKTKITPTLDLPLVVSK
CCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA