Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yccX [H]
Identifier: 218688804
GI number: 218688804
Start: 1027052
End: 1027543
Strand: Direct
Name: yccX [H]
Synonym: ECED1_0991
Alternate gene names: 218688804
Gene position: 1027052-1027543 (Clockwise)
Preceding gene: 218688801
Following gene: 218688812
Centisome position: 19.71
GC content: 51.42
Gene sequence:
>492_bases ATGGTTTCACCGAGGCTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGA TTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGT CCGGAGTTTTCCATGGATTTGCAACGCGTCCATTAAGGATAAGGAGAGCAGCAATGTCGAAAGTCTGCATAATTGCCTGG GTTTACGGGCGAGTTCAGGGCGTAGGATTCCGCTACACCACGCAGTACGAAGCGAAAAAACTGGGACTAACCGGGTACGC CAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCGGTGACGAAGGGCAGGTGGAAAAATTAATACAGTGGTTAA AAAGTGGCGGCCCGCGTTCAGCGCGTGTGGAACGGGTGCTTAGCGAGCCGCATCATCCCTCCGGGGAGTTAACGGATTTT CGTATCCGTTAA
Upstream 100 bases:
>100_bases AGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGGCGAATAAGCGCCGCGTGCTAACCATTTTC CCTGATGATCAACAATATCG
Downstream 100 bases:
>100_bases ATGCATTTTACCGGTTTAGGCAGGCCAGCAATTTTGGTGGCTTGCTTTGCCGGACCTTTCGGGAACAGTCGGTACAGATA GCGGCTGTTACCTTTTTCTT
Product: acylphosphatase
Products: NA
Alternate protein names: Acylphosphate phosphohydrolase [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MVSPRLALPSMRATAPEKTHGWRRSNDFSRPLANTKRTLIIYFSVDAKKWASLSGVFHGFATRPLRIRRAAMSKVCIIAW VYGRVQGVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGDEGQVEKLIQWLKSGGPRSARVERVLSEPHHPSGELTDF RIR
Sequences:
>Translated_163_residues MVSPRLALPSMRATAPEKTHGWRRSNDFSRPLANTKRTLIIYFSVDAKKWASLSGVFHGFATRPLRIRRAAMSKVCIIAW VYGRVQGVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGDEGQVEKLIQWLKSGGPRSARVERVLSEPHHPSGELTDF RIR >Mature_163_residues MVSPRLALPSMRATAPEKTHGWRRSNDFSRPLANTKRTLIIYFSVDAKKWASLSGVFHGFATRPLRIRRAAMSKVCIIAW VYGRVQGVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGDEGQVEKLIQWLKSGGPRSARVERVLSEPHHPSGELTDF RIR
Specific function: Unknown
COG id: COG1254
COG function: function code C; Acylphosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acylphosphatase-like domain [H]
Homologues:
Organism=Escherichia coli, GI1787203, Length=92, Percent_Identity=96.7391304347826, Blast_Score=189, Evalue=7e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020456 - InterPro: IPR001792 - InterPro: IPR017968 [H]
Pfam domain/function: PF00708 Acylphosphatase [H]
EC number: =3.6.1.7 [H]
Molecular weight: Translated: 18290; Mature: 18290
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: PS00150 ACYLPHOSPHATASE_1 ; PS00151 ACYLPHOSPHATASE_2 ; PS51160 ACYLPHOSPHATASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPRLALPSMRATAPEKTHGWRRSNDFSRPLANTKRTLIIYFSVDAKKWASLSGVFHGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH ATRPLRIRRAAMSKVCIIAWVYGRVQGVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVAC CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCCCCCCEEEEEE GDEGQVEKLIQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR CCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEC >Mature Secondary Structure MVSPRLALPSMRATAPEKTHGWRRSNDFSRPLANTKRTLIIYFSVDAKKWASLSGVFHGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH ATRPLRIRRAAMSKVCIIAWVYGRVQGVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVAC CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCCCCCCEEEEEE GDEGQVEKLIQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR CCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]