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The map label for this gene is ycbX [H]

Identifier: 218688783

GI number: 218688783

Start: 1003837

End: 1004946

Strand: Reverse

Name: ycbX [H]

Synonym: ECED1_0970

Alternate gene names: 218688783

Gene position: 1004946-1003837 (Counterclockwise)

Preceding gene: 218688790

Following gene: 218688780

Centisome position: 19.29

GC content: 50.27

Gene sequence:

>1110_bases
GTGGCGACATTAACCCGGCTTTTTATTCATCCTGTTAAATCGATGCGCGGCATTGGTCTTACACATACCCTGGCAGATGT
CAGTGGTCTGGCCTTCGATCGCATCTTTATGATCACTGAACCTGACGGTACGTTTATTACCGCTCGCCAGTTTCCGCTAA
TGGTACGGTTTACTCCTTCACCCGTGCATGATGGCTTGCATCTCACCGCACCAGATGGCAGTAGTGCATATGTTCGTTTT
GCTGATTTCGCCACACAAGACGCACCAACCGAAGTTTGGGGCACACATTTTACCGCGCGAATTGCGCCAGACGCGATCAA
CAAATGGCTAAGTGGATTTTTCTCCCGCGAAGTGCAATTACGCTGGGTGGGGCCACAAATGACCCGGCGCGTGAAACGCC
ACAACACTGTACCCCTGTCATTTGCTGATGGCTATCCTTACCTTCTTGCTAACGAGGCCTCGTTACGTGATCTCCAACAA
CGTTGTCCGGCCAGTGTAAAAATGGAGCAATTCCGCCCCAATCTGGTGGTTTCCGGTGCATCGGCCTGGGAAGAAGATAG
CTGGAAAGTGGTTCGCATTGGTGATGTCGTGTTTGATGTGGTTAAGCCTTGTAGCCGCTGTATTTTCACCACCGTCAGCC
CAGAAAAAGGGCAAAAACATCCGGCAGGCGAACCATTAAAAACACTGCAATCTTTCCGTACTGCTCAGGATAACGGCGAT
GTCGATTTTGGTCAGAATTTAATTGCCCGTAATAGCGGCGTGATTCGCGTTGGCGATGAGGTGGAAATTCTGGCAACGGC
TCCAGCTAAAATTTACGGCGCAGGTGCCGCTGATGATACTGCCAACATCACGCAACAACCGGACGCAAACGTAGATATTG
ACTGGCAGGGACAGGCATTTCGTGGAAATAACCAACAGGTGCTGCTGGAGCAATTAGAAAATCAGGGAATTCGTATCCCT
TATTCTTGCCGCGCGGGCATTTGTGGAAGTTGCCGTGTTCAGCTTTTAGAAGGCGAAGTCACGCCGCTAAAAAAATCAGC
AATAGGCGATGATGGCACTATTCTTTGCTGTAGTTGTGTACCGAAGACTGCGCTTAAGCTGGCGCGTTAG

Upstream 100 bases:

>100_bases
CATATTGTCACTTTTACTCTAAGAAAATTGTTGCGCATTATAGCTAATAAGCGCGTCATGTCATAAAGTTGAGGGCTTAT
TTTCATTTGAGGACCGCACC

Downstream 100 bases:

>100_bases
ACTGCCTGTTCGAGGCTGAAGCTGTCAACATTAACCTGCGGTTTCAGCCTGTCGTTCATGATTTTAATGGCGTCGCCCAA
CTGCATCGCGCGACCCGCAA

Product: putative 2Fe-2S cluster-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MATLTRLFIHPVKSMRGIGLTHTLADVSGLAFDRIFMITEPDGTFITARQFPLMVRFTPSPVHDGLHLTAPDGSSAYVRF
ADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
RCPASVKMEQFRPNLVVSGASAWEEDSWKVVRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAGAADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIP
YSCRAGICGSCRVQLLEGEVTPLKKSAIGDDGTILCCSCVPKTALKLAR

Sequences:

>Translated_369_residues
MATLTRLFIHPVKSMRGIGLTHTLADVSGLAFDRIFMITEPDGTFITARQFPLMVRFTPSPVHDGLHLTAPDGSSAYVRF
ADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
RCPASVKMEQFRPNLVVSGASAWEEDSWKVVRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAGAADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIP
YSCRAGICGSCRVQLLEGEVTPLKKSAIGDDGTILCCSCVPKTALKLAR
>Mature_368_residues
ATLTRLFIHPVKSMRGIGLTHTLADVSGLAFDRIFMITEPDGTFITARQFPLMVRFTPSPVHDGLHLTAPDGSSAYVRFA
DFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQR
CPASVKMEQFRPNLVVSGASAWEEDSWKVVRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGDV
DFGQNLIARNSGVIRVGDEVEILATAPAKIYGAGAADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPY
SCRAGICGSCRVQLLEGEVTPLKKSAIGDDGTILCCSCVPKTALKLAR

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=283, Percent_Identity=32.8621908127208, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI31542713, Length=280, Percent_Identity=30.7142857142857, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI157388923, Length=269, Percent_Identity=23.4200743494424, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1787179, Length=369, Percent_Identity=98.1029810298103, Blast_Score=753, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17540702, Length=279, Percent_Identity=30.1075268817204, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17561286, Length=258, Percent_Identity=30.6201550387597, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71990971, Length=261, Percent_Identity=30.2681992337165, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI25147498, Length=238, Percent_Identity=27.3109243697479, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45550400, Length=289, Percent_Identity=30.1038062283737, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI17647607, Length=249, Percent_Identity=27.710843373494, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 40533; Mature: 40401

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLTRLFIHPVKSMRGIGLTHTLADVSGLAFDRIFMITEPDGTFITARQFPLMVRFTPS
CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCEEEEEECCC
PVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQL
CCCCCCEEECCCCCCEEEEEEECCCCCCCCHHHCCCEEEEECHHHHHHHHHHHHCCEEEE
RWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGA
EEECHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEECC
SAWEEDSWKVVRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
CCCCCCCEEEEEEHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCC
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAGAADDTANITQQPDANVDIDWQGQAF
CCCCCHHHHCCCCEEEECCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEECCCEE
RGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGEVTPLKKSAIGDDGTILCCSCV
CCCCHHHHHHHHHCCCEEEEHHCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEECCC
PKTALKLAR
CHHHHHHCC
>Mature Secondary Structure 
ATLTRLFIHPVKSMRGIGLTHTLADVSGLAFDRIFMITEPDGTFITARQFPLMVRFTPS
CHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCEEEEEECCC
PVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQL
CCCCCCEEECCCCCCEEEEEEECCCCCCCCHHHCCCEEEEECHHHHHHHHHHHHCCEEEE
RWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGA
EEECHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEECC
SAWEEDSWKVVRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
CCCCCCCEEEEEEHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCC
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAGAADDTANITQQPDANVDIDWQGQAF
CCCCCHHHHCCCCEEEECCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEECCCEE
RGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGEVTPLKKSAIGDDGTILCCSCV
CCCCHHHHHHHHHCCCEEEEHHCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEECCC
PKTALKLAR
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]