Click here to switch to the map view.

The map label for this gene is ycaP [H]

Identifier: 218688746

GI number: 218688746

Start: 960032

End: 960724

Strand: Direct

Name: ycaP [H]

Synonym: ECED1_0933

Alternate gene names: 218688746

Gene position: 960032-960724 (Clockwise)

Preceding gene: 218688741

Following gene: 218688747

Centisome position: 18.43

GC content: 47.91

Gene sequence:

>693_bases
ATGAAGGCGTTTGATCTCCACCGTATGGCATTCGATAAAGTGCCTTTTGATTTCCTTGGCGAAGTTGCACTACGTAGTCT
TTATACCTTTGTACTGGTCTTTTTGTTCCTCAAAATGACCGGAAGACGCGGTGTGCGGCAGATGTCGCTGTTTGAAGTGT
TAATCATTCTGACACTGGGTTCAGCGGCGGGAGATGTGGCGTTTTATGATGATGTGCCGATGGTCCCGGTACTTATCGTC
TTTATTACTCTGGCGTTGTTATACCGCCTGGTAATGTGGTTGATGGCGCACAGTGAAAAACTGGAAGATCTTCTGGAAGG
CAAGCCGGTTGTCATTATTGAAGATGGCGAGCTGGCCTGGTCGAAACTCAATAACTCCAACATGACGGAATTTGAGTTCT
TTATGGAGCTACGATTGCGCGGTGTAGAGCAGTTGGGGCAGGTACGTCTGGCGATTCTCGAAACCAACGGGCAAATCAGT
GTTTATTTCTTTGAAGATGACAAGGTGAAACCGGGATTACTTATTTTACCCAGTGACTGTACTCAGCGTTACAAAGTGGT
GCCGGAGTCGGCGGACTATGCCTGCATCCGTTGCAGTGAAATCATTCATATGAACGCGGGGGAAAAACAATTATGTCCGC
GCTGTGCAAATCCAGAATGGACGAAGGCAAGTCGGGCTAAACGGGTGACCTGA

Upstream 100 bases:

>100_bases
GCAATAATACGGGTTTTATCTCAAAGGTGCTATCACCGCCGCCACGCTGATGAACTGTTAGCTATGCTTTTAGCGGATTA
ACTACGATAAGAGCATAAAA

Downstream 100 bases:

>100_bases
CAGCCAAAACATCGGTTTTTTGAAAATAATCCGAGAGATTCTTTTGTGTGACGCGTGCCTCATTTTTGCCCTCAACGGTT
TTACTCATTGCGATGCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIV
FITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMNAGEKQLCPRCANPEWTKASRAKRVT

Sequences:

>Translated_230_residues
MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIV
FITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMNAGEKQLCPRCANPEWTKASRAKRVT
>Mature_230_residues
MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIV
FITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMNAGEKQLCPRCANPEWTKASRAKRVT

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=230, Percent_Identity=99.5652173913043, Blast_Score=471, Evalue=1e-134,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 26268; Mature: 26268

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLG
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
SAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAW
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEE
SKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQISVYFFEDDKVKPGLLILPSDC
HHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCCEEEECCCC
TQRYKVVPESADYACIRCSEIIHMNAGEKQLCPRCANPEWTKASRAKRVT
CHHHEECCCCCCCHHEEHHHHHCCCCCCHHHCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLG
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
SAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAW
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEE
SKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQISVYFFEDDKVKPGLLILPSDC
HHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCCEEEECCCC
TQRYKVVPESADYACIRCSEIIHMNAGEKQLCPRCANPEWTKASRAKRVT
CHHHEECCCCCCCHHEEHHHHHCCCCCCHHHCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]