| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218688710
Identifier: 218688710
GI number: 218688710
Start: 932124
End: 932627
Strand: Reverse
Name: 218688710
Synonym: ECED1_0897
Alternate gene names: NA
Gene position: 932627-932124 (Counterclockwise)
Preceding gene: 218688711
Following gene: 218688707
Centisome position: 17.9
GC content: 49.01
Gene sequence:
>504_bases ATGAGCCATTTTCGCGATTTGTACCTGGCAAACAAAAAGAGCCGGGACGCGAGGCGGGAGGTTACAGGGATTCTGCGCAA TCAGGCTGAAAAGCTGGTTGCTTTTTATGAGCAGTGGCTGGAATTGCCTTCAGAGACATGGGAAGACAAAGACGGCGAGC ATCATCGTTACGTTGATACGGGGTTTCCGTGCAGAAACGATCGGGACTTCAGGCCATTTCCGGTAAATATGATTGCAACC GACACAGATAACATATTCCGGATGGCTGTAAGAACATGGGTTGACTCACACGATGAAGGAGAGTCGGTAAACATAGTCCT GGCAATGGAGTTACATTCCGTCGGAAAAGACGGTGTATCTCTTCGGGTTCGCGTGGAAGATGATACCTCCATTCGCGTGG TCATCAACGGAGACGGTGACAGGGAATGGCTGCCGATAGTAAACAGTATGAAGATGCATATTATCAGCAAGCTGCAAAGA AGAACGCCATCCGCATTCCGTTAA
Upstream 100 bases:
>100_bases ATAGAATTTAAAGTATCAGTCATTCACGGGTGAAAACTTGCGCACAATATGAGGTGAGCGCAGAATACAGGCTGGCATAA ACAGACCAAAGGAGAGCGAC
Downstream 100 bases:
>100_bases GAGAGCTGGAGAGTCGGGGCATAAATTTTTTATGCCCCGGCGAAGCAGCAGACAAGCGAAGCGCGTCAGCTGGCGTTATC CAGAAGCAGGGCATAGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSHFRDLYLANKKSRDARREVTGILRNQAEKLVAFYEQWLELPSETWEDKDGEHHRYVDTGFPCRNDRDFRPFPVNMIAT DTDNIFRMAVRTWVDSHDEGESVNIVLAMELHSVGKDGVSLRVRVEDDTSIRVVINGDGDREWLPIVNSMKMHIISKLQR RTPSAFR
Sequences:
>Translated_167_residues MSHFRDLYLANKKSRDARREVTGILRNQAEKLVAFYEQWLELPSETWEDKDGEHHRYVDTGFPCRNDRDFRPFPVNMIAT DTDNIFRMAVRTWVDSHDEGESVNIVLAMELHSVGKDGVSLRVRVEDDTSIRVVINGDGDREWLPIVNSMKMHIISKLQR RTPSAFR >Mature_166_residues SHFRDLYLANKKSRDARREVTGILRNQAEKLVAFYEQWLELPSETWEDKDGEHHRYVDTGFPCRNDRDFRPFPVNMIATD TDNIFRMAVRTWVDSHDEGESVNIVLAMELHSVGKDGVSLRVRVEDDTSIRVVINGDGDREWLPIVNSMKMHIISKLQRR TPSAFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19517; Mature: 19386
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFRDLYLANKKSRDARREVTGILRNQAEKLVAFYEQWLELPSETWEDKDGEHHRYVDT CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC GFPCRNDRDFRPFPVNMIATDTDNIFRMAVRTWVDSHDEGESVNIVLAMELHSVGKDGVS CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCE LRVRVEDDTSIRVVINGDGDREWLPIVNSMKMHIISKLQRRTPSAFR EEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SHFRDLYLANKKSRDARREVTGILRNQAEKLVAFYEQWLELPSETWEDKDGEHHRYVDT CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC GFPCRNDRDFRPFPVNMIATDTDNIFRMAVRTWVDSHDEGESVNIVLAMELHSVGKDGVS CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCE LRVRVEDDTSIRVVINGDGDREWLPIVNSMKMHIISKLQRRTPSAFR EEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA