| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is V
Identifier: 218688694
GI number: 218688694
Start: 920109
End: 920705
Strand: Reverse
Name: V
Synonym: ECED1_0881
Alternate gene names: NA
Gene position: 920705-920109 (Counterclockwise)
Preceding gene: 218688695
Following gene: 218688693
Centisome position: 17.67
GC content: 56.45
Gene sequence:
>597_bases GTGGAGAAACACCCGTTGAATGCTGAAATCATGCGACTGCTGGAAAACATGGTCCGCACCGGCGTCGTTTCGGAGGTGGA TCTGAAAAACTGGCGCATTCGCGCTACCAGCGGCGGACTGACAACGGACTGGCTCCGCTGGAACTGCACACGCGCCGGGG CGTTTAAAATCTGGCTGCCCCCCTCCCCCGGTGAACAGGTGCTGTTGCTCTGCCCGGGCGGCAGTCCTGAAATGGCCGTT GTGGCTGGCAGTCTCTACAGCGAAGAACACCCGGCGCCCGGCACAAAACAGAATGAAGTGATACTCCTTGCACCTGACGG TGCCGAGATACGCTATGACGCAGAAAAAGGCGCGCTGACGGTGAAAGGAATCAAAACCGCAGAGATCTCTGCGGAAACAC GTATTACCCTGGACACACCGGCCGTAGAGTGCACAAAACATCTGAAGGCCAGGACGTTTGAACTGACTGACGGTGGCACC ATGAAAGGGGATATCACACACAGTAACGGAAACTTACGCTCAAATGGTGTTACCGTGCATACGCACGTTCATAACGGTGT TCAGTCCGGCGGAAGCATGACAGGGGGGCCGAAATGA
Upstream 100 bases:
>100_bases TGGTCTCTGCCGGTAATGCCGTCCGCTATCCGCAACGCGAACTGCTGGGATTCAGTGAAGCCGACAGACAGAAAGTGACG GAAATCATTATCAACAACCT
Downstream 100 bases:
>100_bases CACCGGTATGCACAGGCATGAACCCGCATGGTAGCGGATGCATCAGTGACACAGAACACCTCCGCCACTCTGTAAACAAT ATTCTGACCACCCCGCGCGG
Product: Baseplate assembly protein GpV from prophage
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein V; Phage P2 Baseplate Assembly GpV-Like Protein; Pyocin R2_PP; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Prophage LambdaW5 Baseplate Assembly Protein V; Phage Baseplate Protein; Baseplate Assembly Protein V Prophage; LOW QUALITY PROTEIN Baseplate Assembly Protein V; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MEKHPLNAEIMRLLENMVRTGVVSEVDLKNWRIRATSGGLTTDWLRWNCTRAGAFKIWLPPSPGEQVLLLCPGGSPEMAV VAGSLYSEEHPAPGTKQNEVILLAPDGAEIRYDAEKGALTVKGIKTAEISAETRITLDTPAVECTKHLKARTFELTDGGT MKGDITHSNGNLRSNGVTVHTHVHNGVQSGGSMTGGPK
Sequences:
>Translated_198_residues MEKHPLNAEIMRLLENMVRTGVVSEVDLKNWRIRATSGGLTTDWLRWNCTRAGAFKIWLPPSPGEQVLLLCPGGSPEMAV VAGSLYSEEHPAPGTKQNEVILLAPDGAEIRYDAEKGALTVKGIKTAEISAETRITLDTPAVECTKHLKARTFELTDGGT MKGDITHSNGNLRSNGVTVHTHVHNGVQSGGSMTGGPK >Mature_198_residues MEKHPLNAEIMRLLENMVRTGVVSEVDLKNWRIRATSGGLTTDWLRWNCTRAGAFKIWLPPSPGEQVLLLCPGGSPEMAV VAGSLYSEEHPAPGTKQNEVILLAPDGAEIRYDAEKGALTVKGIKTAEISAETRITLDTPAVECTKHLKARTFELTDGGT MKGDITHSNGNLRSNGVTVHTHVHNGVQSGGSMTGGPK
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21277; Mature: 21277
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKHPLNAEIMRLLENMVRTGVVSEVDLKNWRIRATSGGLTTDWLRWNCTRAGAFKIWLP CCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCEECEEEEEEEECCEEEEEEC PSPGEQVLLLCPGGSPEMAVVAGSLYSEEHPAPGTKQNEVILLAPDGAEIRYDAEKGALT CCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEE VKGIKTAEISAETRITLDTPAVECTKHLKARTFELTDGGTMKGDITHSNGNLRSNGVTVH EECCEEEEECCCEEEEEECCHHHHHHHHHHEEEEECCCCEEECEEEECCCCEECCCEEEE THVHNGVQSGGSMTGGPK EEECCCHHCCCCCCCCCC >Mature Secondary Structure MEKHPLNAEIMRLLENMVRTGVVSEVDLKNWRIRATSGGLTTDWLRWNCTRAGAFKIWLP CCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCEECEEEEEEEECCEEEEEEC PSPGEQVLLLCPGGSPEMAVVAGSLYSEEHPAPGTKQNEVILLAPDGAEIRYDAEKGALT CCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEE VKGIKTAEISAETRITLDTPAVECTKHLKARTFELTDGGTMKGDITHSNGNLRSNGVTVH EECCEEEEECCCEEEEEECCHHHHHHHHHHEEEEECCCCEEECEEEECCCCEECCCEEEE THVHNGVQSGGSMTGGPK EEECCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA