Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is 218688688
Identifier: 218688688
GI number: 218688688
Start: 915762
End: 916298
Strand: Direct
Name: 218688688
Synonym: ECED1_0874
Alternate gene names: NA
Gene position: 915762-916298 (Clockwise)
Preceding gene: 218688687
Following gene: 218688697
Centisome position: 17.58
GC content: 53.82
Gene sequence:
>537_bases GTGCCGGAACCGGCAGCTTCCGCGATCGCGACTGAGGTGAAAAAGATGATGATGATTTATGGGATGTTTGTGTTTCAGTT AAGTACCCTGCCGCATCAGCAGGTGGAACAGAGTAAACGCTGGCGACACGTCAGTAATGAACGGGTTAACCGTTCATCCT CCTGGCAGTATATTGGCTCTGGTGAAGATCACATCACGATGTCCGGTGTGCTCTGTCCGGAAATCACCGGCGGGGAGGTG TCACTGACTGCCCTGAACACCCTGGCCTACACAGGATTACCCTGGCCACTGATTGATGGTGTCGGACAGATTTACGGGAT GTATGTCATTACGGAAATCAGGACCACCCGTCAGGAGCTGGATCGCTATGGCATGGCCCGCAAAATTGAGTTCACTGTCA GCTTTCAGCGATGCAATGAAGATCTGCGTGAGCGTCTTCAGTCGGGCTCGGTGGGTGATCTGATGGCAGGATTAAAAAAC AGCGCGTCGTCGGCCCTGTCGTCGGCGTCCTCTGCGCTGTCTGGTCTCATGTTGTGA
Upstream 100 bases:
>100_bases GAGATACATGTGCATCTTCACGGGGTGAGTTCGCATAATCCCCGGGAACTGGCGCGCATGGTTGGTGACGCTGTCAGGGC GGAAATGAACAGAATGGCAC
Downstream 100 bases:
>100_bases AGGTCACTGTTCAGGCTTCGGCTTCTTTTCCCCAGCCAACCTTATAGTCCAGAATCGCCGCCGTATCGTTCAGGGCGGCG ATCTCTTTTTTCATGTTACG
Product: putative tail protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage P2 GpU Family Protein; Phage-Related Tail Protein; Phage Tail Protein U; Tail Fiber Protein; Phage-Related Protein; Phage Protein U; Phage Tail Assembly Protein; Fels-2 Prophage Protein; Tail Fiber Protein Of Prophage; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Bacteriophage P2 Tail Protein GPU; Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPEPAASAIATEVKKMMMIYGMFVFQLSTLPHQQVEQSKRWRHVSNERVNRSSSWQYIGSGEDHITMSGVLCPEITGGEV SLTALNTLAYTGLPWPLIDGVGQIYGMYVITEIRTTRQELDRYGMARKIEFTVSFQRCNEDLRERLQSGSVGDLMAGLKN SASSALSSASSALSGLML
Sequences:
>Translated_178_residues MPEPAASAIATEVKKMMMIYGMFVFQLSTLPHQQVEQSKRWRHVSNERVNRSSSWQYIGSGEDHITMSGVLCPEITGGEV SLTALNTLAYTGLPWPLIDGVGQIYGMYVITEIRTTRQELDRYGMARKIEFTVSFQRCNEDLRERLQSGSVGDLMAGLKN SASSALSSASSALSGLML >Mature_177_residues PEPAASAIATEVKKMMMIYGMFVFQLSTLPHQQVEQSKRWRHVSNERVNRSSSWQYIGSGEDHITMSGVLCPEITGGEVS LTALNTLAYTGLPWPLIDGVGQIYGMYVITEIRTTRQELDRYGMARKIEFTVSFQRCNEDLRERLQSGSVGDLMAGLKNS ASSALSSASSALSGLML
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19660; Mature: 19529
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPAASAIATEVKKMMMIYGMFVFQLSTLPHQQVEQSKRWRHVSNERVNRSSSWQYIGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GEDHITMSGVLCPEITGGEVSLTALNTLAYTGLPWPLIDGVGQIYGMYVITEIRTTRQEL CCCCEEECCEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DRYGMARKIEFTVSFQRCNEDLRERLQSGSVGDLMAGLKNSASSALSSASSALSGLML HHCCCCEEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PEPAASAIATEVKKMMMIYGMFVFQLSTLPHQQVEQSKRWRHVSNERVNRSSSWQYIGS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GEDHITMSGVLCPEITGGEVSLTALNTLAYTGLPWPLIDGVGQIYGMYVITEIRTTRQEL CCCCEEECCEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DRYGMARKIEFTVSFQRCNEDLRERLQSGSVGDLMAGLKNSASSALSSASSALSGLML HHCCCCEEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA