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The map label for this gene is ybiM [H]

Identifier: 218688592

GI number: 218688592

Start: 800419

End: 800823

Strand: Reverse

Name: ybiM [H]

Synonym: ECED1_0771

Alternate gene names: 218688592

Gene position: 800823-800419 (Counterclockwise)

Preceding gene: 218688594

Following gene: 218688591

Centisome position: 15.37

GC content: 45.68

Gene sequence:

>405_bases
ATGCATGTCATTGATTTGTCTTATTTTGTAAAAACATATCGTTCAAAAAATAAGCACATCTCTGTCAATTTTTTACGTCA
TTTTCATCGCGCAGGCGACCTACACTTATCTGGCACTACCCGTTGTATTTATGAGGATGTCATTATGAAAAAGTGCCTCA
CACTACTGATTGCCACCGTCCTGAGCGGAATCTCTCTCACGGCTTATGCCGCGCAACCGATGAGTAACCTGGACAGAGGT
CAACTACGGCCCGCCGGTACCGTTTCGGCAACTGGCGCATCAAACCTAAGCGATCTGGAGGATAAACTGGCAGAAAAAGC
GCGCGAACAAGGCGCGAAAGGTTATGTCATTAATTCCGCAGGCGGAAATGACCAGATGTTCGGTACTGCAATCATCTACA
AATAA

Upstream 100 bases:

>100_bases
CCCGCATAACGCGACAGGGTAAATATCTGGCTGCGTTTATCATTTCTAAAAACCTTCACATGGCTATGGTTTATGGCAAT
TCACCATAAAAATCATCATC

Downstream 100 bases:

>100_bases
CCCCACCAACGTAACTGCATTCGTCTCTGGATGCAGTTTTCGTCCGATTTGTAAGCAAAAAACATCAAATATGAACGCAA
TGTAAATAAATGTATTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHVIDLSYFVKTYRSKNKHISVNFLRHFHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGISLTAYAAQPMSNLDRG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTAIIYK

Sequences:

>Translated_134_residues
MHVIDLSYFVKTYRSKNKHISVNFLRHFHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGISLTAYAAQPMSNLDRG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTAIIYK
>Mature_134_residues
MHVIDLSYFVKTYRSKNKHISVNFLRHFHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGISLTAYAAQPMSNLDRG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTAIIYK

Specific function: Affects biofilm formation and mucoidy [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=97.6744186046512, Blast_Score=171, Evalue=1e-44,
Organism=Escherichia coli, GI1787355, Length=86, Percent_Identity=43.0232558139535, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 14679; Mature: 14679

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVIDLSYFVKTYRSKNKHISVNFLRHFHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATV
CEEEHHHHHHHHHHCCCCEEEHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LSGISLTAYAAQPMSNLDRGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSA
HCCCCHHHHHHCCHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
GGNDQMFGTAIIYK
CCCCCCEEEEEEEC
>Mature Secondary Structure
MHVIDLSYFVKTYRSKNKHISVNFLRHFHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATV
CEEEHHHHHHHHHHCCCCEEEHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LSGISLTAYAAQPMSNLDRGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSA
HCCCCHHHHHHCCHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
GGNDQMFGTAIIYK
CCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]