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The map label for this gene is ybiA [H]

Identifier: 218688584

GI number: 218688584

Start: 791215

End: 791520

Strand: Reverse

Name: ybiA [H]

Synonym: ECED1_0763

Alternate gene names: 218688584

Gene position: 791520-791215 (Counterclockwise)

Preceding gene: 218688588

Following gene: 218688582

Centisome position: 15.19

GC content: 48.37

Gene sequence:

>306_bases
ATGAGAAAACCTGAAATACTGTATAAACAGCCAATATTGTGGCATTTTTCGGTTTTCAGGGGTAATGGTTTTTCTGTTTC
GGGAAAGCGGCTCGCAATAACCAGCAGGATGATGCGTAAAGCGCTTCGCGCTAAATTCGAACAACATGCAGAACTGCGTA
CACTCTTGCGGGCAACCGCGTCCGCAAAACTGGTTGAGCATACGCAAAATGATGCTTACTGGGGAGATGGCGGTAATGGT
CAGGGCAAGAATCGCCTGGGGTACCTTTTAATGGCGTTGCGCGGACAATTGGCTGCGGAGAAGTAA

Upstream 100 bases:

>100_bases
CATCTGCCGCTGCGGCGCACGGGGAATAAAGTCGGGGATCTGTTCCTGAAGCGCCTTATACCAGGCGGCAATTTGCGCTT
TAAGCGCGGCGGTTAATGCC

Downstream 100 bases:

>100_bases
CGCATCGGGTGGCTTGTGGGCGTTAAAACAGAGAAATCTTTTTGCCGCGCTCGCAAATGGCTGACAAGTGCTTGTTGTGA
AATGCCGGATGCGGCGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MRKPEILYKQPILWHFSVFRGNGFSVSGKRLAITSRMMRKALRAKFEQHAELRTLLRATASAKLVEHTQNDAYWGDGGNG
QGKNRLGYLLMALRGQLAAEK

Sequences:

>Translated_101_residues
MRKPEILYKQPILWHFSVFRGNGFSVSGKRLAITSRMMRKALRAKFEQHAELRTLLRATASAKLVEHTQNDAYWGDGGNG
QGKNRLGYLLMALRGQLAAEK
>Mature_101_residues
MRKPEILYKQPILWHFSVFRGNGFSVSGKRLAITSRMMRKALRAKFEQHAELRTLLRATASAKLVEHTQNDAYWGDGGNG
QGKNRLGYLLMALRGQLAAEK

Specific function: Required for swarming motility [H]

COG id: COG3236

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ybiA family [H]

Homologues:

Organism=Escherichia coli, GI1787017, Length=70, Percent_Identity=78.5714285714286, Blast_Score=115, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012816 [H]

Pfam domain/function: PF08719 DUF1768 [H]

EC number: NA

Molecular weight: Translated: 11460; Mature: 11460

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPEILYKQPILWHFSVFRGNGFSVSGKRLAITSRMMRKALRAKFEQHAELRTLLRATA
CCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAKLVEHTQNDAYWGDGGNGQGKNRLGYLLMALRGQLAAEK
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKPEILYKQPILWHFSVFRGNGFSVSGKRLAITSRMMRKALRAKFEQHAELRTLLRATA
CCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAKLVEHTQNDAYWGDGGNGQGKNRLGYLLMALRGQLAAEK
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503 [H]