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The map label for this gene is ybhS [H]

Identifier: 218688579

GI number: 218688579

Start: 784868

End: 786001

Strand: Reverse

Name: ybhS [H]

Synonym: ECED1_0758

Alternate gene names: 218688579

Gene position: 786001-784868 (Counterclockwise)

Preceding gene: 218688580

Following gene: 218688578

Centisome position: 15.09

GC content: 55.03

Gene sequence:

>1134_bases
ATGAGTAATCCGATCCTGTCCTGGCGTCGCGTGCGGGCGCTGTGCGTCAAAGAGACGCGGCAGATTGTTCGCGATCCGAG
TAGCTGGCTGATTGCGGTAGTGATCCCACTGCTACTGCTGTTTATTTTTGGATACGGCATTAACCTCGACTCCAGCAAGC
TGCGCGTCGGGATTTTACTGGAACAGCGTAGCGAAGCGGCGCTGGATTTCACCCACACCATGACCGGTTCGCCCTACATC
GACGCCACCATCAGCGATAACCGTCAGGAACTGATCGCCAAAATGCAGGCGGGGAAAATTCGCGGTCTGGTGGTTATTCC
GGTGGATTTCGCCGAACAGATGGAGCGCGCCAACGCCACCGCACCGATTCAGGTGATCACCGACGGCAGTGAGCCGAATA
CCGCTAACTTTGTGCAGGGGTATGTCGAAGGGATCTGGCAGATCTGGCAAATGCAGCGCGCGGAGGATAACGGGCAGACT
TTTGAACCGCTTATTGATGTACAAACCCGCTACTGGTTTAACCCCGCGGCGATAAGCCAGCACTTTATTATCCCCGGTGC
GGTGACCATTATCATGACGGTCATCGGCGCGATTCTCACCTCGCTGGTGGTAGCGCGAGAATGGGAACGCGGCACCATGG
AGGCTTTGCTCTCTACGGAGATTACCCGCACGGAGCTGCTGCTGTGTAAGCTGATCCCTTATTACTTTCTCGGGATGCTG
GCGATGTTGCTGTGTATGCTGGTGTCGGTGTTTATTCTCGGCGTGCCGTATCGCGGGTCGCTGCTGATTCTGTTTTTTAT
CTCCAGCCTGTTTTTACTCAGTACCCTGGGGATGGGGCTGCTGATTTCCACGATTACCCGCAACCAGTTCAACGCCGCTC
AGGTGGCCCTGAACGCGGCTTTTCTGCCGTCGATTATGCTTTCCGGCTTTATATTTCAGATAGACAGTATGCCCGCGGTG
ATCCGCGCGGTGACGTACATTATTCCCGCACGTTATTTCGTCAGCACCCTGCAAAGCCTGTTCCTCGCCGGGAATATTCC
AGTGGTGCTGATAGTGAACGTGCTGTTTTTGATCGCTTCGGCGGTGATGTTTATCGGCCTGACGTGGCTGAAAACCAAAC
GTCGGCTGGATTAG

Upstream 100 bases:

>100_bases
GACGATTTGAAAGCGCAGTCGGCCAACGATGAGCAACCCGATCCCACGATGGAGCAAGCCTTTATTCAGTTGATCCACGA
CTGGGATAAGGAGCATAGCA

Downstream 100 bases:

>100_bases
GGAGAAGAGCATGTTTCATCGCTTATGGACGTTAATCCGCAAAGAGTTGCAGTCGCTGCTGCGCGAACCGCAAACCCGCG
CAATTCTGATTTTACCCGTG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYI
DATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML
AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAV
IRAVTYIIPARYFVSTLQSLFLAGNIPVVLIVNVLFLIASAVMFIGLTWLKTKRRLD

Sequences:

>Translated_377_residues
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYI
DATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML
AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAV
IRAVTYIIPARYFVSTLQSLFLAGNIPVVLIVNVLFLIASAVMFIGLTWLKTKRRLD
>Mature_376_residues
SNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYID
ATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTF
EPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLA
MLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVI
RAVTYIIPARYFVSTLQSLFLAGNIPVVLIVNVLFLIASAVMFIGLTWLKTKRRLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=377, Percent_Identity=99.7347480106101, Blast_Score=759, Evalue=0.0,
Organism=Escherichia coli, GI48994943, Length=338, Percent_Identity=31.6568047337278, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1787010, Length=335, Percent_Identity=26.5671641791045, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI226510979, Length=265, Percent_Identity=28.3018867924528, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42075; Mature: 41943

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILL
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
EQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANAT
ECCCCHHHEEHEECCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCC
APIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQ
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECHHHHCC
HFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML
CEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLIVNVLFLIAS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVMFIGLTWLKTKRRLD
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILL
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
EQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANAT
ECCCCHHHEEHEECCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCC
APIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQ
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECHHHHCC
HFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML
CEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLIVNVLFLIAS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVMFIGLTWLKTKRRLD
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]