Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is fur [H]
Identifier: 218688489
GI number: 218688489
Start: 689404
End: 689850
Strand: Reverse
Name: fur [H]
Synonym: ECED1_0664
Alternate gene names: 218688489
Gene position: 689850-689404 (Counterclockwise)
Preceding gene: 218688491
Following gene: 218688484
Centisome position: 13.24
GC content: 48.1
Gene sequence:
>447_bases ATGACTGATAACAATACCGCCCTAAAGAAAGCTGGCCTGAAAGTAACGCTTCCTCGCTTGAAAATCCTGGAAGTTCTTCA GGAGCCGGACAACCATCACGTCAGTGCGGAAGATTTATACAAACGTCTGATCGATATGGGTGAAGAAATTGGTCTGGCTA CGGTATATCGCGTACTGAACCAGTTTGACGACGCTGGTATCGTCACCCGCCACAATTTTGAAGGCGGTAAATCCGTATTT GAACTAACACAGCAACATCACCACGATCACCTGATCTGCCTCGACTGCGGTAAGGTTATCGAATTTAGTGATGATTCCAT CGAAGCTCGTCAGCGTGAAATCGCCGCAAAACATGGCATTCGCCTGACTAACCACAGTCTCTATCTTTACGGTCACTGTG CCGAAGGCGATTGCCGCGAAGATGAGCACGCACACGAAGGCAAATAA
Upstream 100 bases:
>100_bases TTTAGGCGTGGCAATTCTATAATGATACGCATTATCTCAAGAGCAAATTCTGTCACTTCTTCTAATGAAGTGAACCGCTT AGTAACAGGACAGATTCCGC
Downstream 100 bases:
>100_bases GCCAGCCTGAACGAGAAAAGCCAACCTGCAGGTTGGCTTTTTTATACAAGGGAAATAAGAAAAGCGAGAGTTACAGCTCT CACTTATTTGTTATTACTGC
Product: ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF ELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK
Sequences:
>Translated_148_residues MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF ELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK >Mature_147_residues TDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFE LTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of several outer-membrane proteins including the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=148, Percent_Identity=100, Blast_Score=305, Evalue=1e-84,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16795; Mature: 16664
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLN CCCCCCHHHHCCCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGI HCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCE RLTNHSLYLYGHCAEGDCREDEHAHEGK EEECCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLN CCCCCHHHHCCCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGI HCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCE RLTNHSLYLYGHCAEGDCREDEHAHEGK EEECCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9055816 [H]