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The map label for this gene is tfaQ [H]

Identifier: 218688390

GI number: 218688390

Start: 573577

End: 573933

Strand: Direct

Name: tfaQ [H]

Synonym: ECED1_0553

Alternate gene names: 218688390

Gene position: 573577-573933 (Clockwise)

Preceding gene: 218688389

Following gene: 218688398

Centisome position: 11.01

GC content: 49.86

Gene sequence:

>357_bases
TTGCCTGCAAACAGTACCGATATTGCACCGCCAGATATTCCGGCTGGCTTCGTGGTTGTTTTCAACAGTGATGAGGCATC
GTGGCATCTCGTTGAAGACCATCGGGGTAAAACGGTTTATGACGTGGCATCAGGGGACGCGTTATTTATTTCTGAGCTCG
GTCCGTTACCGGAAAATGTTACCTGGTTATCCCCGGCAGGGGAGTTTCAGAAGTGGAACGGCACATCATGGATAAAGGAT
ACGGAGGAAGAAACCTCGTTGCTGGAAGCCTGTAAGATGTATCGGGTGTTGCTGAACCGAGTTGATACATCAACTGCCCC
TGATATTGAGTGGCCTGTGAACCCTGTCAGAGAGTAA

Upstream 100 bases:

>100_bases
CAAACTTGACGACAGATTTCAGTGGCTTGGGGCTCTCATCAATCAGGCGTTTTTCCTGATTCTTTTGTAAGTCTCTTGTG
CCATTCCACCTCATACAGGT

Downstream 100 bases:

>100_bases
TCATTGGGATTATGCCGCAGCACGTCGTGCGCAAGAACGTGCTGCGGCTGGATGCTATTTTTTCCCTGAAGCGGAAAACA
TTACTACAGTACCTTTAACC

Product: tail fiber assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPANSTDIAPPDIPAGFVVVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPAGEFQKWNGTSWIKD
TEEETSLLEACKMYRVLLNRVDTSTAPDIEWPVNPVRE

Sequences:

>Translated_118_residues
MPANSTDIAPPDIPAGFVVVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPAGEFQKWNGTSWIKD
TEEETSLLEACKMYRVLLNRVDTSTAPDIEWPVNPVRE
>Mature_117_residues
PANSTDIAPPDIPAGFVVVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPAGEFQKWNGTSWIKDT
EEETSLLEACKMYRVLLNRVDTSTAPDIEWPVNPVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI2367120, Length=154, Percent_Identity=66.8831168831169, Blast_Score=196, Evalue=4e-52,
Organism=Escherichia coli, GI1787637, Length=154, Percent_Identity=66.2337662337662, Blast_Score=194, Evalue=1e-51,
Organism=Escherichia coli, GI1787402, Length=155, Percent_Identity=30.9677419354839, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 13131; Mature: 12999

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANSTDIAPPDIPAGFVVVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENV
CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCC
TWLSPAGEFQKWNGTSWIKDTEEETSLLEACKMYRVLLNRVDTSTAPDIEWPVNPVRE
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PANSTDIAPPDIPAGFVVVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENV
CCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCC
TWLSPAGEFQKWNGTSWIKDTEEETSLLEACKMYRVLLNRVDTSTAPDIEWPVNPVRE
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]