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The map label for this gene is higB-1 [H]

Identifier: 218688347

GI number: 218688347

Start: 528810

End: 529142

Strand: Direct

Name: higB-1 [H]

Synonym: ECED1_0508

Alternate gene names: 218688347

Gene position: 528810-529142 (Clockwise)

Preceding gene: 218688344

Following gene: 218688348

Centisome position: 10.15

GC content: 41.74

Gene sequence:

>333_bases
TTGAATAATGGACAAGGAGATGAGAGAGGAATGGCTCAAAAGAAAAATATAAGGAGTTTTCGTGATGCCTGGTTGGCTGA
TTTTTTTGTCCATTCAACGCCACATCGAAAGATCCCTGCTGAAATCCATACCACGTTATCACGAAAGTTGGACATCATTA
ATGCTGCCACTTCTCATTGGGATTTACGCTCCCCTCCGGGGAACCGATACGAAGAGTTATCCGGGAAATTACAGGAATAC
TCCTCCATTAGAGTGAATAAACAGTACCGACTGATTTTTAAATGGGTTAATGGCAAGGCCGAAGAATTGTTTTTAGACCC
ACACAACTACTAA

Upstream 100 bases:

>100_bases
GACCTCCCTTTGTGAAATATCATGCTAGCGCGCGGGGAGGGATGGCGCAAATGGAGTTGATTGTTGCACTTGAGCACAGT
GCTTGTGTGCATTACAATGA

Downstream 100 bases:

>100_bases
AACATAGCTGTCGTATTGACGAGAAAGGTAAAACTATGAAACAGGCAACAAGAAAACCGACGACACCCGGAGATATTCTT
CTCTATGAATATCTGGAACC

Product: putative RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNNGQGDERGMAQKKNIRSFRDAWLADFFVHSTPHRKIPAEIHTTLSRKLDIINAATSHWDLRSPPGNRYEELSGKLQEY
SSIRVNKQYRLIFKWVNGKAEELFLDPHNY

Sequences:

>Translated_110_residues
MNNGQGDERGMAQKKNIRSFRDAWLADFFVHSTPHRKIPAEIHTTLSRKLDIINAATSHWDLRSPPGNRYEELSGKLQEY
SSIRVNKQYRLIFKWVNGKAEELFLDPHNY
>Mature_110_residues
MNNGQGDERGMAQKKNIRSFRDAWLADFFVHSTPHRKIPAEIHTTLSRKLDIINAATSHWDLRSPPGNRYEELSGKLQEY
SSIRVNKQYRLIFKWVNGKAEELFLDPHNY

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG3549

COG function: function code R; Plasmid maintenance system killer protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007711 [H]

Pfam domain/function: PF05015 Plasmid_killer [H]

EC number: NA

Molecular weight: Translated: 12899; Mature: 12899

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNGQGDERGMAQKKNIRSFRDAWLADFFVHSTPHRKIPAEIHTTLSRKLDIINAATSHW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
DLRSPPGNRYEELSGKLQEYSSIRVNKQYRLIFKWVNGKAEELFLDPHNY
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MNNGQGDERGMAQKKNIRSFRDAWLADFFVHSTPHRKIPAEIHTTLSRKLDIINAATSHW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
DLRSPPGNRYEELSGKLQEYSSIRVNKQYRLIFKWVNGKAEELFLDPHNY
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]