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The map label for this gene is ybaA

Identifier: 218688319

GI number: 218688319

Start: 497406

End: 497759

Strand: Direct

Name: ybaA

Synonym: ECED1_0479

Alternate gene names: 218688319

Gene position: 497406-497759 (Clockwise)

Preceding gene: 218688317

Following gene: 218688327

Centisome position: 9.55

GC content: 48.59

Gene sequence:

>354_bases
ATGAAGTATGTTGATGGTTTTGTTGTTGCCGTTCCTGCCGATAAAAAGGATGCCTATCGGGAAATGGCCGCTAAGGCCGC
GCCATTATTTAAAGAGTTCGGTGCGCTTCGTATTGTCGAATGCTGGGCCAGCGATGTACCGGATGGTAAAGTGACCGATT
TTCGTATGGCGGTGAAAGCGGAAGAGAATGAAGAGGTTGTCTTTAGCTGGATTGAATACCCTTCAAAAGAGGTCCGCGAC
GCTGCTAATCAAAAGATGATGTCGGACCCACGGATGAAAGAGTTCGGCGAGTCCATGCCGTTTGACGGCAAGCGAATGAT
CTATGGTGGATTCGAATCAATCATCGACGAGTAG

Upstream 100 bases:

>100_bases
CCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGT
ACGCTTCGGAGGTATGTCTG

Downstream 100 bases:

>100_bases
GTAGCGTGACGGGCTGTGCGGCGTGCCGTCAGCCCTAAAATTCACAAATGTTGCTCGGCCCAGCGTAAGAAATCCTCTTT
CGGTAATGCCTTGCTGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRD
AANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE

Sequences:

>Translated_117_residues
MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRD
AANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE
>Mature_117_residues
MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRD
AANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=117, Percent_Identity=100, Blast_Score=236, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBAA_ECO57 (P0AAQ8)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A85543
- PIR:   E90692
- RefSeq:   NP_286197.1
- RefSeq:   NP_308536.1
- ProteinModelPortal:   P0AAQ8
- SMR:   P0AAQ8
- EnsemblBacteria:   EBESCT00000026425
- EnsemblBacteria:   EBESCT00000059354
- GeneID:   914613
- GeneID:   957429
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z0568
- KEGG:   ecs:ECs0509
- GeneTree:   EBGT00050000010906
- HOGENOM:   HBG403715
- OMA:   QRMIFGG
- ProtClustDB:   CLSK879674
- BioCyc:   ECOL83334:ECS0509-MONOMER
- InterPro:   IPR009874
- PIRSF:   PIRSF007028

Pfam domain/function: PF07237 DUF1428

EC number: NA

Molecular weight: Translated: 13318; Mature: 13318

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEC
EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE
CCCCCEEHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEECCHHHHHCC
>Mature Secondary Structure
MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEC
EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE
CCCCCEEHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796