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The map label for this gene is psiF

Identifier: 218688247

GI number: 218688247

Start: 424249

End: 424569

Strand: Direct

Name: psiF

Synonym: ECED1_0407

Alternate gene names: 218688247

Gene position: 424249-424569 (Clockwise)

Preceding gene: 218688246

Following gene: 218688248

Centisome position: 8.14

GC content: 47.04

Gene sequence:

>321_bases
ATGAAAATTACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACCTTAAC
CCCACAACAACAGCGTATGACCTCTTGTAATCAGCAGGCGACGGCGCAGGCGTTGAAAGGGGATGCTCGTAAGACCTACA
TGAGTGATTGCCTGAAGAACAGCAAATCTGCGCCTGGTGAAAAAAGTTTGACGCCACAGCAGCAAAAGATGCGCGAATGT
AATAATCAAGCAACACAACAATCTCTGAAAGGGGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTG
A

Upstream 100 bases:

>100_bases
ATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGACAGATCACGGGCGCATACGCTCATGGTTAAA
ACATGAAGAGGGATGGTGCG

Downstream 100 bases:

>100_bases
TACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATTTCATACTTCTGCCTTTAGCCCCGTCTCTATA
ATTTGGGAAAATTGTTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMREC
NNQATQQSLKGDDRNKFMSACLKKAA

Sequences:

>Translated_106_residues
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMREC
NNQATQQSLKGDDRNKFMSACLKKAA
>Mature_106_residues
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMREC
NNQATQQSLKGDDRNKFMSACLKKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081731, Length=106, Percent_Identity=100, Blast_Score=215, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSIF_ECOL6 (P0AFM5)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_752425.1
- EnsemblBacteria:   EBESCT00000040339
- GeneID:   1036168
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c0491
- GeneTree:   EBGT00050000011623
- HOGENOM:   HBG416556
- OMA:   MKECLSG
- ProtClustDB:   PRK11505
- InterPro:   IPR011690

Pfam domain/function: PF07769 PsiF_repeat

EC number: NA

Molecular weight: Translated: 11687; Mature: 11687

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKN
CHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
SKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKN
CHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
SKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157