Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yaiW [H]
Identifier: 218688241
GI number: 218688241
Start: 418841
End: 419935
Strand: Direct
Name: yaiW [H]
Synonym: ECED1_0401
Alternate gene names: 218688241
Gene position: 418841-419935 (Clockwise)
Preceding gene: 218688240
Following gene: 218688243
Centisome position: 8.04
GC content: 53.79
Gene sequence:
>1095_bases ATGTCGCGCGTCAATCATCTATCTTCGCTGTCATTGTTGGCGGTTCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCA ACCGTTGAAAAAGGGCGAAAAAGCGATAGATGTGGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCG ATGCTTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGGTTGGCACCGACGCTGGAAAACGTCTGCTCGGTGCTG GCGGTGGCGCAGCAGGAGTCAAATTATCAGGCAGATCCGGCCGTTCCGGGCTTAAGCAAGATCGCCTGGCAAGAGATTGA CCGTCGTGCTGAACGGATGCACATTCCTGCTTTTCTGGTGCATACCGCGCTAAAAATCAAATCGCCAAACGGCAAAAGCT ATAGCGAACGGTTAGATTCGGTGCGTACTGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAGCATGGTGCCAATG GGGCAGACGTTGTTTGGTTCGCTTAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCA TACCAAGGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGTCGCGGCGGGTTGTGGTTTGGTA CTTACCATTTACTGAATTATCCCGCCAGCTATAGCGCGCCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCC AGCCGTAATGCCGCGTTTCAGAACGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTA CGACAGTAAAGAGCCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCGGGAAAACTGGGGATGAGCGACAGTGAAATTC GCCGCCAGTTAGAGAAAGGCGACAGCTTCTCTTTTGAGGAGACGGCGCTGTACAAGAAAGTTTATCAACTTGCCGAAGCG AAAACGGGTAAATCACTACCCCGCGAAATGTTGCCTGGCATTCAACTGGAAAGCCCGAAAATCACCCGCAACCTGACTAC GGCCTGGTTTGCGAAGCGCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGA
Upstream 100 bases:
>100_bases GTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCT TGAGCTAAAAAGGAGAAGTA
Downstream 100 bases:
>100_bases TCAAACAGGAATGTCATGCCAGATAAAGCGTTTTAGGTCCTATCTGGCAAGTAAATCTTACTGGCGGCGATGTCGCCAGT GCAGCCATAGCGCCACTACT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVL AVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEA KTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRARCMKQ
Sequences:
>Translated_364_residues MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVL AVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEA KTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRARCMKQ >Mature_363_residues SRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLA VAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMG QTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYAS RNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAK TGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRARCMKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786576, Length=364, Percent_Identity=98.9010989010989, Blast_Score=746, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011673 - ProDom: PD041438 [H]
Pfam domain/function: PF07759 DUF1615 [H]
EC number: NA
Molecular weight: Translated: 40384; Mature: 40252
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDL CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHH ATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLV HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH HTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMGQTLFGSLNPVRTGGPMQVS HHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEE IAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA EEEEHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCEEEEECCCCCCCC SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKG CCHHHHHHHHHHHCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC DSFSFEETALYKKVYQLAEAKTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRAR CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH CMKQ HCCC >Mature Secondary Structure SRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDL CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHH ATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLV HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH HTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMGQTLFGSLNPVRTGGPMQVS HHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEE IAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA EEEEHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCEEEEECCCCCCCC SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKG CCHHHHHHHHHHHCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC DSFSFEETALYKKVYQLAEAKTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRAR CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH CMKQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]